Transcript Information: S_Transcript_471532.p1


Annotated TAIR IDAT4G39952.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18527680-18530007 | Forward length=775
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3748310033124
Replicate 20.46611527234186
Replicate 30.38963526937184
Condition 2: 8 Hour
Replicate 10
Replicate 20.47264468957169
Replicate 30.45033480855594
Condition 3: 24 Hour
Replicate 10.30767441536048
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_471532.p1 GENE.S_Transcript_471532~~S_Transcript_471532.p1 ORF type:internal len:142 (+),score=18.33,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|0.025,PPR|PF01535.16|0.0073,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.12,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|7.8e+02,PPR_1|PF12854.3|4.4e+03,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|5.7 S_Transcript_471532:3-425(+)
CTTTCTAAACCCGACTTGTCCACCAAAGTCTTTTATCAAACCCCTTGTAAAGACCCATTTCTTTGGAATTCTATTATCAAATCCCACTTTTCCGATGGTGGGTACCAAAAAGCTCTTGACTTTTTTCTGGGTATGCGTTTTTCCAATTGCCCACCTAATAATTTCACCATCCCAATGGCTGCCACTGCTTGCGCCGAGCTCGGGGAGGTTGTTTATGGAGAGATCATTCATGGGTTGGTTACAAAATTTGGTCTGTTTGGTGGGAATTCTGCCATTGGATCTTCTTTAATGTATTTGTATTCGAAATGTGGCTGTATGGGTAATGCACTCCATGTGTTCGATGAGATGCCTGTTAGAGATGTGGTCGCTTGGACCACGCTTTTAGTTGGTTATTTGCAGAATGGTGAGAGTGAGAGGGCTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_471532.p1 GENE.S_Transcript_471532~~S_Transcript_471532.p1 ORF type:internal len:142 (+),score=18.33,PPR_2|PF13041.2|2.7e-06,PPR_2|PF13041.2|1.2e+03,PPR_2|PF13041.2|5.3,PPR_2|PF13041.2|0.025,PPR|PF01535.16|0.0073,PPR|PF01535.16|0.0017,PPR|PF01535.16|0.12,PPR_1|PF12854.3|4.8,PPR_1|PF12854.3|7.8e+02,PPR_1|PF12854.3|4.4e+03,PPR_1|PF12854.3|5.1,PPR_1|PF12854.3|5.7 S_Transcript_471532:3-425(+)
LSKPDLSTKVFYQTPCKDPFLWNSIIKSHFSDGGYQKALDFFLGMRFSNCPPNNFTIPMAATACAELGEVVYGEIIHGLVTKFGLFGGNSAIGSSLMYLYSKCGCMGNALHVFDEMPVRDVVAWTTLLVGYLQNGESERAL

Click here to download the sequence:
Link to NCBI Protein BLAST