Transcript Information: S_Transcript_471533.p1


Annotated TAIR IDAT4G39952.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:18527680-18530007 | Forward length=775
E-Value6E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.18872026829321
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.44640786557728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_471533.p1 GENE.S_Transcript_471533~~S_Transcript_471533.p1 ORF type:internal len:113 (+),score=16.27,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.081,PPR_2|PF13041.2|13,PPR_2|PF13041.2|9e+02,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|0.017 S_Transcript_471533:1-336(+)
TTTCCAATGATGGGTACCAAAAAGCCCTTGACTTTTTTTCTGGGTATGCGTTTTTCCAATTGCCCACCTAATAATTTCACCATCCCAATGGCTGCCACTGCTTGCGCCGAGCTCGGGGAGGTTGTTTATGGAGAGATCATTCATGGGTTGGTTACAAAATTTGGTCTGTTTGGTGGGAATTCTGCCATTGGATCTTCTTTAATGTATTTGTATTCGAAATGTGGCTGTATGGGTAATGCACTCCATGTGTTCGATGAGATGCCTGTTAGAGATGTGGTCGCTTGGACCACGCTTTTAGTTGGTTATTTGCAGAATGGTGAGAGTGAGAGGGCTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_471533.p1 GENE.S_Transcript_471533~~S_Transcript_471533.p1 ORF type:internal len:113 (+),score=16.27,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.081,PPR_2|PF13041.2|13,PPR_2|PF13041.2|9e+02,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|0.017 S_Transcript_471533:1-336(+)
FPMMGTKKPLTFFLGMRFSNCPPNNFTIPMAATACAELGEVVYGEIIHGLVTKFGLFGGNSAIGSSLMYLYSKCGCMGNALHVFDEMPVRDVVAWTTLLVGYLQNGESERAL

Click here to download the sequence:
Link to NCBI Protein BLAST