Transcript Information: S_Transcript_47160.p1


Annotated TAIR IDAT5G55480.1
Annotated Gene NameSHV3-like 1
Annotated Gene Symbol(s)SVL1
Annotation TypeOrtholog
Chromosome Positionchr5:22474277-22477819 | Forward length=766
E-Value1.5E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.4205314106834
Replicate 211.993678267676
Replicate 312.357332647672
Condition 2: 8 Hour
Replicate 113.83049966206
Replicate 217.224343642975
Replicate 317.004171730396
Condition 3: 24 Hour
Replicate 16.8213479420692
Replicate 28.3377612752428
Replicate 35.1336904541387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47160.p1 GENE.S_Transcript_47160~~S_Transcript_47160.p1 ORF type:complete len:791 (+),score=144.69,GDPD|PF03009.13|1.5e-05,GDPD|PF03009.13|1.2e-27 S_Transcript_47160:217-2589(+)
ATGGGAGCAGCTGGTAGAAATCTAAGTGGGTTTTTAGTGTTAAGTGTTTTGGTGTTGTTTTGCTTGTCTACATTTGCTTCAGCTCAGCGATCTAAAACTCCCAGCTCATCATCATGGAAAACACTCAATGGCAATCCACCTCTTGTTATAGCACGTGGTGGATTCTCAGGGTTGTTTCCTGATTCTAGTTCATATGCCTACAATCTGGCAATGATGACTAGTGTGCCCGATGTGGTCTTGTGGTGTGATGTTCAGTTGACAAAAGATGGAATCGGGATTTGCTTCCCTGATATCAAGCTTGATAATTCCTCCGACATTCAACATCTCTATCCTAAGAGGGCGAACCAGTATGTTGTTAATGGTGTTAAAACACAAGGTTACTTCCCCATCGATTTTACCCTCAAGGAGCTGGATCCAGTGTCTTTAACTCAAGGAATTTACTCTCGTAGTCCTGATTTTGATCAGAGTATGTTCCAAATTCAGACTGTTGATGATGTGTTTACACAAAATAAACCTGAAGGCTTCTGGTTAAATATTCAGCATAGTGCTTTCTACAGCCAGCACAAGTTGAGCATGAGGAGTTTTGTAATTAGTGCTTCAAAGAGTGTGATCATTAGTCACATCTCATCTCCTGAAGTTGCCTTTTTGCAAAGCCTCGCCAGGCCATTTGCATCAACCAAAACACAATTGGTTTTCCGCTTCCTTGATCAGGATTCTGCTGAACCTTCAACCAACCAGACTTACGGATCTCTGTTAAAGAATCTCACATTTGTTAAGACATTTGCCTCTGGAATCCTTGTTCCAAAGGCTTACATATGGCCTGTCGATTCAACCAACCAGACTTACGGATCTCTGTTAAAGAATCTCACATTTGTTAAGACATTTGCCTCTGGAATCCTTGTTCCAAAGGCTTACATATGGCCTGTCGATGAGACTCAATACCTTCTACCCCATACTTCTCTTGTTGCAGATGCTCATAAAGCTGGCCTCGAAGTTTTTGCTGCTAATTTTGCAAATGATGTTAGTTTGCCCTACAACTACAGTTACAACCCAGTTTCTGAGTATCTTTCATATATTGACAATGGTGACTTCTCAGTTGATGGTGTGCTGTCTGATTTCCCAATAACACCTTCAGAAGCCAGAGATTGCTTTATCCAATTACCTAAAAGTTCATCAAGCAAAGATAAGCCCTTGGTTATATCCCATGAGGGGGCAAGTGGAGACTTTCCTGGCTGTACAGATCTAGCATACACAAAGGCTATTTCAGATGGTGCTGATGTCATTGACTGCCCTGTTCAAATGTCGAAAGATGGGACACCCTTCTGCTCAAGCTCTGCCGATCTCATTAATAGCACCACTGTTGGTCAATCACAATTCAGGAGCCTTCTAAAAACAGTTACTGACATTCAGCCTACCCCTGGAATATATTCATTCACCATGGACTGGGCTGATATTCAAGGCTTGACTCCTGCTATATCAAACCCATTTTCGGCCTACTTCCTGAACAGAAATCCCAAGTTTAAGAATTCTGGAAAAATCATTTCTTTAGCTGACTTTCTGGCACTTGCCAAAAATGCAAGCTCATCTCCTCGTGTTTTGATCAAGATAGAGAATGCAAAATACCTGGCATTAAACGAGGGCCTGAGTGTAACTGATGCAGTTCAGAAGGCTTTAGACAAAGCTGGTTATTCACCCGAGAAGGTTATGATCCAGTCCTCCAACAGCTCAGTCCTCAAGGCAATGAAGGGCAAGGACTATGAATTTGTATATGAAGTCAGTGAGAGCATCCGTGATGCCCTTAATGCTACTGTTGCTGACATCAAGACCTTTGCTAGTTCTGTGGTTGTCACTAAGGAGTCCGTCTTCCCAATGAATCAGGGATTCCTCACAGCAATGACCAACATCGTATCACGTTTACAAGACTTCAAACTTAATGTGTATGTTCAGGTTTTCCGTAATGAATTCGTGAGCCAAGCATATGATTTCTTCTCTGACCCGATTGTGGAGATAAATTCATTTTTCATGGGAGCTGGAATTGACGGTGTCGTCACAGACTTTCCAGAAACAGCTGCTGCATACAAGAAGAATCTGTGCCTGAAGATGAAGACCACACCTATGTACATGAGCCCCGTTCAGCCCGGCCAACTCGTACAACTCATCAGCCCAGGATCGATGCCCCCAGCTGAGGCTCCAAACCCGCTCCTAACTGTTGCTGATGTGTCAGAGGCACCTTTGCCTGCCGCTGTGGTGCAAAATTCCACGGCCCCTGCTCCGTCAGCCCCAAAATCCTCGAAAAACGGCCAACACCATATTGCAGCTTCTGCACTATTATCGTGCTTGGCTATGATTGTTGCAGCTGCTCTGATGTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47160.p1 GENE.S_Transcript_47160~~S_Transcript_47160.p1 ORF type:complete len:791 (+),score=144.69,GDPD|PF03009.13|1.5e-05,GDPD|PF03009.13|1.2e-27 S_Transcript_47160:217-2589(+)
MGAAGRNLSGFLVLSVLVLFCLSTFASAQRSKTPSSSSWKTLNGNPPLVIARGGFSGLFPDSSSYAYNLAMMTSVPDVVLWCDVQLTKDGIGICFPDIKLDNSSDIQHLYPKRANQYVVNGVKTQGYFPIDFTLKELDPVSLTQGIYSRSPDFDQSMFQIQTVDDVFTQNKPEGFWLNIQHSAFYSQHKLSMRSFVISASKSVIISHISSPEVAFLQSLARPFASTKTQLVFRFLDQDSAEPSTNQTYGSLLKNLTFVKTFASGILVPKAYIWPVDSTNQTYGSLLKNLTFVKTFASGILVPKAYIWPVDETQYLLPHTSLVADAHKAGLEVFAANFANDVSLPYNYSYNPVSEYLSYIDNGDFSVDGVLSDFPITPSEARDCFIQLPKSSSSKDKPLVISHEGASGDFPGCTDLAYTKAISDGADVIDCPVQMSKDGTPFCSSSADLINSTTVGQSQFRSLLKTVTDIQPTPGIYSFTMDWADIQGLTPAISNPFSAYFLNRNPKFKNSGKIISLADFLALAKNASSSPRVLIKIENAKYLALNEGLSVTDAVQKALDKAGYSPEKVMIQSSNSSVLKAMKGKDYEFVYEVSESIRDALNATVADIKTFASSVVVTKESVFPMNQGFLTAMTNIVSRLQDFKLNVYVQVFRNEFVSQAYDFFSDPIVEINSFFMGAGIDGVVTDFPETAAAYKKNLCLKMKTTPMYMSPVQPGQLVQLISPGSMPPAEAPNPLLTVADVSEAPLPAAVVQNSTAPAPSAPKSSKNGQHHIAASALLSCLAMIVAAALMF*

Click here to download the sequence:
Link to NCBI Protein BLAST