Transcript Information: S_Transcript_471836.p1


Annotated TAIR IDAT3G16610.1
Annotated Gene Namepentatricopeptide (PPR) repeat-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:5656371-5658335 | Reverse length=654
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23975676788451
Replicate 20
Replicate 30.16615077552793
Condition 2: 8 Hour
Replicate 10
Replicate 20.60464455783045
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_471836.p1 GENE.S_Transcript_471836~~S_Transcript_471836.p1 ORF type:internal len:111 (+),score=19.01,PPR_2|PF13041.2|6e-05,PPR_2|PF13041.2|4.4e-10,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.4e-05,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|2.1e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.053 S_Transcript_471836:2-331(+)
AAGAAATGGAAGAAGGATCTATCCCATGGTCACATTCTCAAATCAGGGCATATTTCAGATTTAATGGTTAGCAATACTATTCTTTCAATGTATGCTAAATGTGGCATGTTAGATGATGCTGTCAGGTTTTTTCGAGAAATGAATCCAAGAGATAGAGTGTCTTATGGTGCAATGATTTCTGGATTTGTACAAAATGGTACCAGTCTTCAAGCCTTGAAGTTCTTTCGGAATATGCTAGTATCAGGAATAGATCCAGATGAGACTACTATGCTTGTGCTGCTACCAGCTTGTTCACATTTAGCTGCCCTGAAATATGGAGCCTGTGCCCAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_471836.p1 GENE.S_Transcript_471836~~S_Transcript_471836.p1 ORF type:internal len:111 (+),score=19.01,PPR_2|PF13041.2|6e-05,PPR_2|PF13041.2|4.4e-10,PPR|PF01535.16|1.8e-05,PPR|PF01535.16|1.4e-05,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|0.035,PPR_1|PF12854.3|2.1e+03,PPR_3|PF13812.2|0.23,PPR_3|PF13812.2|0.053 S_Transcript_471836:2-331(+)
KKWKKDLSHGHILKSGHISDLMVSNTILSMYAKCGMLDDAVRFFREMNPRDRVSYGAMISGFVQNGTSLQALKFFRNMLVSGIDPDETTMLVLLPACSHLAALKYGACAH

Click here to download the sequence:
Link to NCBI Protein BLAST