Transcript Information: S_Transcript_472065.p1


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value1.8E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21636586370065
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.18188494829046
Replicate 30
Condition 3: 24 Hour
Replicate 10.53280203635596
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_472065.p1 GENE.S_Transcript_472065~~S_Transcript_472065.p1 ORF type:internal len:123 (+),score=34.39,Chloroa_b-bind|PF00504.17|5.5e-20 S_Transcript_472065:1-366(+)
GTTTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGGGGTACGCTGAACTACTTTGGGAAACCCATCCCCATCAATCTTATTGTGGCTGTCATTGCTGAGATTGTTCTTGTGGGAGCTGCAGAGTACTACAGAATTATTAATGGCCTGAACTTCGAAGACAAACTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTTGCAAATGATCCAGACCAAGCTGCACTGCTAAAGGTGAAGGAAATTAAGAATGGCAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCATATGTCACCGGAGAAGGTCCTGTTGAGAACCTAGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_472065.p1 GENE.S_Transcript_472065~~S_Transcript_472065.p1 ORF type:internal len:123 (+),score=34.39,Chloroa_b-bind|PF00504.17|5.5e-20 S_Transcript_472065:1-366(+)
VWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGAAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLL

Click here to download the sequence:
Link to NCBI Protein BLAST