Transcript Information: S_Transcript_47223.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6836639901022
Replicate 20.74160637168117
Replicate 30.46494292647732
Condition 2: 8 Hour
Replicate 11.9712545671299
Replicate 21.1279923683896
Replicate 33.2242458562157
Condition 3: 24 Hour
Replicate 11.4685635960063
Replicate 22.0949741793262
Replicate 32.3314494828259


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47223.p1 GENE.S_Transcript_47223~~S_Transcript_47223.p1 ORF type:5prime_partial len:119 (+),score=11.81,zf-RVT|PF13966.2|1.5e-07,zf-RVT|PF13966.2|8.3e+03 S_Transcript_47223:2-358(+)
CGTGAGACTACCTTACCGTTAGCAATTTGGAATGCTCCGAAGAGGATTAATACTAATGACATGCTGCAACGGCGTCCGGGGTGGTGCCTCTCTCCTGATGTTTGTGCGATGTGCAGGGCGGATGGTGAGTTAGCTTCTCACTTATTTTTCCATTTCAAGCTGGCGCGTGCTCTTTGGGCCAAACTCTTTGGTGTGAAGGGGGAAGTGTTGGTGCTCCCCGCGTCTATCCTTGACTTTCTGCAGATTCGTCATGCGGGCTTTGGGAGGGTCAAGGAGTTGCGGATCCTTTGGAGGAACTCTCTTTTGTGGTGCATCTGCTTGGAGCGTAATGCTAGGGTGTTTTCCAATACTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47223.p1 GENE.S_Transcript_47223~~S_Transcript_47223.p1 ORF type:5prime_partial len:119 (+),score=11.81,zf-RVT|PF13966.2|1.5e-07,zf-RVT|PF13966.2|8.3e+03 S_Transcript_47223:2-358(+)
RETTLPLAIWNAPKRINTNDMLQRRPGWCLSPDVCAMCRADGELASHLFFHFKLARALWAKLFGVKGEVLVLPASILDFLQIRHAGFGRVKELRILWRNSLLWCICLERNARVFSNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST