Transcript Information: S_Transcript_472233.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.24789651188219
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.23950390567395
Condition 3: 24 Hour
Replicate 10.1227240645539
Replicate 20.12732478413678
Replicate 30.14169687868043


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_472233.p1 GENE.S_Transcript_472233~~S_Transcript_472233.p1 ORF type:internal len:178 (+),score=17.89,RVT_1|PF00078.23|8e-32 S_Transcript_472233:1-531(+)
ATCCAAATGAGTGAGTTTAGACCTATTAGCCTTTGTAATGTTCTTTATAAAATCATTTCTAAGGTCCTAGCTAATAGGTTAAAAATGTTCTTACCAAAGATAATATCCCTAAATCAAAGCGCTTTTACCCCTGGGAGATTGATAACGGATAACATTCTGATGGCTTTTGAGTCTTTCCATTTCATGAAGTCTGAAAAGTCTAAAGAAGGTTATGCGGCTCTCAAACTAGATATGGCTAAGGCCTATGATAGAGTGGATTGGAATTTCTTGGAGTTGGTTCTTTTTAAATTTGGTCTTGATCCCGTGTGGGTTGATAGAGTCATGGTGTGTGTAAGGTCGGTCTCCTTTGCTGTGCTCCTTAATGGCTCTCCAACGGAAGATTTCTACCCAGAAAGAGGGCTCCGTCAGGGGGACCCGATATCACCTTACTTGTTTCTTCTTGTTACTGAAGCACTTTCAGGTTTGCTACGCAAAGCGGAGATGCAGGGTGCTCTTTATGGTGTACGCATTTGTCAAGGTGCTCATGATCAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_472233.p1 GENE.S_Transcript_472233~~S_Transcript_472233.p1 ORF type:internal len:178 (+),score=17.89,RVT_1|PF00078.23|8e-32 S_Transcript_472233:1-531(+)
IQMSEFRPISLCNVLYKIISKVLANRLKMFLPKIISLNQSAFTPGRLITDNILMAFESFHFMKSEKSKEGYAALKLDMAKAYDRVDWNFLELVLFKFGLDPVWVDRVMVCVRSVSFAVLLNGSPTEDFYPERGLRQGDPISPYLFLLVTEALSGLLRKAEMQGALYGVRICQGAHDH

Click here to download the sequence:
Link to NCBI Protein BLAST