Transcript Information: S_Transcript_47226.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.28652973451318
Replicate 30
Condition 2: 8 Hour
Replicate 10.13847656050086
Replicate 20.43581523324143
Replicate 30.69207297418771
Condition 3: 24 Hour
Replicate 10.4255496783882
Replicate 20.29433521527724
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47226.p1 GENE.S_Transcript_47226~~S_Transcript_47226.p1 ORF type:5prime_partial len:154 (-),score=19.14,zf-RVT|PF13966.2|2.3e-11,zf-RVT|PF13966.2|3.5e+03 S_Transcript_47226:8-469(-)
CTTAAGGTGAGGGGTTTCACCTCAACCCTTGCTCTTAATAGGATCAATACTAATGACATGCTGCAACGGCGACGTCCGGGGTGGTGTCTCTCTCCTGATGTTTGTGTGATGTGTGGGGCGAGTGGTGAGTCAGCTTCTCATTTATTTTTGCATTGCAAGCTGGCGCGGGCTCTTTGGGCCAAACTCTTTGGTGTGAAGGGAGAGATGTTGGTGTTCCCCGCGACTCGGCTTGCTGGCTTTGGGAGGGACAAGGAGTTGCGGATTCTTTGGAGGAACACCCTCCTAGCTGTGTTGTGGTGCATCTGGTTGGAGCGTAATGCTAGGGTTTTTTCCAGTACCTCTTCATCTCTGGAGTTACTTTGGGAGCGGGTTACTTTCTTGGCCACCTTATGGAGTAAGGCGGTTGGGGCTTTTCGTAGCTACACTATCGGTGGTGTCCAACTCAATTGGGCCTCCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47226.p1 GENE.S_Transcript_47226~~S_Transcript_47226.p1 ORF type:5prime_partial len:154 (-),score=19.14,zf-RVT|PF13966.2|2.3e-11,zf-RVT|PF13966.2|3.5e+03 S_Transcript_47226:8-469(-)
LKVRGFTSTLALNRINTNDMLQRRRPGWCLSPDVCVMCGASGESASHLFLHCKLARALWAKLFGVKGEMLVFPATRLAGFGRDKELRILWRNTLLAVLWCIWLERNARVFSSTSSSLELLWERVTFLATLWSKAVGAFRSYTIGGVQLNWASL*

Click here to download the sequence:
Link to NCBI Protein BLAST