Transcript Information: S_Transcript_472387.p1


Annotated TAIR IDAT5G50175.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G03600.1); Has 43 Blast hits to 43 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20428143-20428481 | Forward length=112
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.31975057329732
Replicate 30.26728603019711
Condition 2: 8 Hour
Replicate 10.30906362778454
Replicate 20
Replicate 30.15446266380421
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.36553687543647


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_472387.p1 GENE.S_Transcript_472387~~S_Transcript_472387.p1 ORF type:5prime_partial len:138 (+),score=17.70 S_Transcript_472387:3-416(+)
CACTTTTTCTCCTCTTCTTCCTGCAGCTCCGCTCTATGGACCACCCTTCTCGCGTTGGCAGGGCTTTCACTAGCAGCAGTATGCCTGGCTGTTGTCGCGCGGACCACAATGGTGGCATGGATCACAGTCCTTGTCCTGCTGGCCTTCAAGGGAAAACGACGACGTGTTCTGGCTCATCAAGGGAAGAAGATCACTGCTGATGTTGCCATGGACCTTATCAAGGTCTTGGTCATGGAACCACGGTTGGTTACAGTTATTTGTGCTACTGCTGTTAAGTCTTATGGCCATGGCTCAAATAACAAGATTCTAATCATTTTTGTTAACCCAGAAAAAAGGGCAAGTATGTGTATTTTCAGATTACTATGCTCTTTATGTGACTGTATGTACTTATCATGTGACTTTTCTGCCATATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_472387.p1 GENE.S_Transcript_472387~~S_Transcript_472387.p1 ORF type:5prime_partial len:138 (+),score=17.70 S_Transcript_472387:3-416(+)
HFFSSSSCSSALWTTLLALAGLSLAAVCLAVVARTTMVAWITVLVLLAFKGKRRRVLAHQGKKITADVAMDLIKVLVMEPRLVTVICATAVKSYGHGSNNKILIIFVNPEKRASMCIFRLLCSLCDCMYLSCDFSAI*

Click here to download the sequence:
Link to NCBI Protein BLAST