Transcript Information: S_Transcript_472401.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16031928454928
Replicate 20
Replicate 30.11110081978073
Condition 2: 8 Hour
Replicate 10.12846620672972
Replicate 20.53908069011389
Replicate 30.25681744102387
Condition 3: 24 Hour
Replicate 10.13159568367828
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_472401.p2 GENE.S_Transcript_472401~~S_Transcript_472401.p2 ORF type:complete len:166 (+),score=7.68,RVT_1|PF00078.23|8.5e-23 S_Transcript_472401:1532-2029(+)
ATGAGTAAGGCCTATGATAGGGTACGGTGGGATTTTCTTAATTCAGTTCTTGTGGAGTTTGGTTTCCCTGATCATTGGATTAGGTTACTACTGAATTGTGTCTCCACGGTGTCGTATCAAGTGTTAGTTAATGGGCAACCAAATGAACCGTTTAAACCGAGTTGTGGTCTGCGACAGGGGGATCCGCTCTCTCCTTATCTTTTCATCCTTTGTGCAGAGGTTCTCTCTTGTATGATGGTTAAAGCACAGGAAGATGGGGCCGTTGTCAAGGGCATTAAAGCAGCGCGAAGTTCGGTTGCTATTTCTCACCTTCTTTTTGCTGATGATGCAACTTTTTTCTTCAGAGGAGGTTTACAGGAATGTATAGCTGTTAAGAAAATTTTGGATGATTACTGTTCAGTTTCGGGCCAACTTATTAATTTGGATAAATCCATTATGATTACGAGTCCGAATACGCACCGAGGTTTCGGAGATTATTCCGGCAAATTTTACATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_472401.p2 GENE.S_Transcript_472401~~S_Transcript_472401.p2 ORF type:complete len:166 (+),score=7.68,RVT_1|PF00078.23|8.5e-23 S_Transcript_472401:1532-2029(+)
MSKAYDRVRWDFLNSVLVEFGFPDHWIRLLLNCVSTVSYQVLVNGQPNEPFKPSCGLRQGDPLSPYLFILCAEVLSCMMVKAQEDGAVVKGIKAARSSVAISHLLFADDATFFFRGGLQECIAVKKILDDYCSVSGQLINLDKSIMITSPNTHRGFGDYSGKFYI*

Click here to download the sequence:
Link to NCBI Protein BLAST