Transcript Information: S_Transcript_47251.p1


Annotated TAIR IDAT3G44480.1
Annotated Gene NameDisease resistance protein (TIR-NBS-LRR class) family
Annotated Gene Symbol(s)RPP1, cog1
Annotation TypeHomolog
Chromosome Positionchr3:16090878-16096041 | Reverse length=1194
E-Value5E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0702279317097
Replicate 21.7153375259194
Replicate 30.98888665327617
Condition 2: 8 Hour
Replicate 12.5155956406269
Replicate 22.1592132735393
Replicate 32.0001465581082
Condition 3: 24 Hour
Replicate 11.9326572525191
Replicate 21.4582613346711
Replicate 31.3523884399526


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47251.p1 GENE.S_Transcript_47251~~S_Transcript_47251.p1 ORF type:5prime_partial len:373 (+),score=60.05,LRR_8|PF13855.2|5.1e+02,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|24,LRR_8|PF13855.2|0.05,LRR_4|PF12799.3|3.4e+02,LRR_4|PF12799.3|2e+02,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|9.9,LRR_4|PF12799.3|0.18 S_Transcript_47251:3-1121(+)
AGCTTTAAAATTGTAGGATACAGGGGCATGAGAATGCCCAAGTGGATGAGTACCTTTCTTTTAAAGACGCGTAATAATCTGAGAGTCTTGACACTTGATTATTTAACAAATGTGGAGTACGTAGTGGATGCAACATCGTCAGTAGTGCTTCCCTCCATCGAGCACCTCAGTCTGAAGTGGATGCCAAAGTTGAAAGGATGGTGGAGATCAGGGATGAGTAAAGGGGCGGGAGATTGCGACGGATCTTTGCCATCGTTTCCCCGTCTTTCTGAGTTGGAAATATTTGAATGCCCTGAGCTGACATGTATGCCTTTTTGCCCCAACGTGGAGGTGCTGGGTTTGATAGGTTTCAATGAAAGACTGCAGATAATGAGCACAGAGACGGATGAGGAGGAAGTGATGACAACTACCGATGATGCTGCTTCATCAGATTTTCAAACTCCAAAACTAAAGAAAGTGGAAATAGACAATGTCACGTGGCTGAAATGGGCAATGCCGACGGAGGCTGTTCAGTGTCTTGAGGAGATGAGCATATTGAGTAACCGCAAGGTGCGGAGTTTGAGAGCAGTTGGGGATCAGGTATTCCGGGGGTGTTCGTCTTCCTTAAGAACCCTACAATTCCAGCAGTGCTTCCGACTGAGGAGTCTTAGTGGAGGAGGGTTGGAGCATCTCACTGCCCTGGAGACCTTAATTTTAGCTGATAACCGAAATTTGAGTCTGGGAAACAGTACTGAGGATGAGGAGGAGGATGACAACCTAACTTGGCAGTCCCTTCGTCAGAGCCTCCGTCATCTGGAATTGAAACATCTCCCAAAGGTGGTGAATCTGCCTGAGGAAATGCAATTCTTGACCTCTCTCCAAACCCTCAAATTATATTATCTTGATGCACTGGAATCGCTTCCAGATTGGATGCCAAAGCTCACCTCCCTCCAAACCCTTGAGATTGCCTATTGCAAAGCACTGAAATCACTGCCAGAATGTTTGTCGGAACTCACATCTCTCAAGCAACTTACGCTATGTGACTGTTCAAAGGCCCTGGAGGAAAGATGCAAACGTCCCGATGGGGAAGATTGGCCCCACATTCAACACATTCCCCATGTTTCTAGTATTTGGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47251.p1 GENE.S_Transcript_47251~~S_Transcript_47251.p1 ORF type:5prime_partial len:373 (+),score=60.05,LRR_8|PF13855.2|5.1e+02,LRR_8|PF13855.2|0.0011,LRR_8|PF13855.2|24,LRR_8|PF13855.2|0.05,LRR_4|PF12799.3|3.4e+02,LRR_4|PF12799.3|2e+02,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|9.9,LRR_4|PF12799.3|0.18 S_Transcript_47251:3-1121(+)
SFKIVGYRGMRMPKWMSTFLLKTRNNLRVLTLDYLTNVEYVVDATSSVVLPSIEHLSLKWMPKLKGWWRSGMSKGAGDCDGSLPSFPRLSELEIFECPELTCMPFCPNVEVLGLIGFNERLQIMSTETDEEEVMTTTDDAASSDFQTPKLKKVEIDNVTWLKWAMPTEAVQCLEEMSILSNRKVRSLRAVGDQVFRGCSSSLRTLQFQQCFRLRSLSGGGLEHLTALETLILADNRNLSLGNSTEDEEEDDNLTWQSLRQSLRHLELKHLPKVVNLPEEMQFLTSLQTLKLYYLDALESLPDWMPKLTSLQTLEIAYCKALKSLPECLSELTSLKQLTLCDCSKALEERCKRPDGEDWPHIQHIPHVSSIWH*

Click here to download the sequence:
Link to NCBI Protein BLAST