Transcript Information: S_Transcript_472515.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14385406073071
Replicate 20.11925832193251
Replicate 30.19938093063352
Condition 2: 8 Hour
Replicate 10.11527238009261
Replicate 20.36278673469827
Replicate 30.69132478718858
Condition 3: 24 Hour
Replicate 10.11808045130051
Replicate 20.12250708960188
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_472515.p1 GENE.S_Transcript_472515~~S_Transcript_472515.p1 ORF type:complete len:185 (+),score=21.49,zf-RVT|PF13966.2|1.1e+03,zf-RVT|PF13966.2|4e-19 S_Transcript_472515:64-618(+)
ATGAATCAATCAGAATCACTCAGACATGATTGGATTAAACACTATTATCTAAAGTGCCAGAATTTCTGGGAGGTTCAGAGAAAGGGGGTTAACTCCTGGGCTTGGAAGAACCTCCTAAGATTAAGGGATGAGATACTGGAGAAGACAGGGACAACAAATAAGGCTACAGAGATGATAACCAAATGGGGTGCAGGGAGGAGGCTAAAGATCAGTAGTATCTATGACTGGTTCTTAAAATCTCCTCAAGGCAACCACTGTACAAAAACAATTTGGGAGCCTGCAGGGATCCCTAAACATCAGATAATTACATGGATGGCAGTCAAGCAAGCTCTCCCAACTATTGATAAGCTGAGTTCCAGAGGGATGCCACTGGTGAACAGATGTGAGCTCTGCTGTATTGCCGCTGAATCCCACCACCATCTATTCTTCCAGTGTCCATATGCCCGAGAAGTTTGGCAATCAATCCTTGTATGGACAGGGCGCACTAGAAGAGGATGGAGTTTATGGCATGAGATGAGATGGCATTATAAGAACAACAAAGGTAAAAGATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_472515.p1 GENE.S_Transcript_472515~~S_Transcript_472515.p1 ORF type:complete len:185 (+),score=21.49,zf-RVT|PF13966.2|1.1e+03,zf-RVT|PF13966.2|4e-19 S_Transcript_472515:64-618(+)
MNQSESLRHDWIKHYYLKCQNFWEVQRKGVNSWAWKNLLRLRDEILEKTGTTNKATEMITKWGAGRRLKISSIYDWFLKSPQGNHCTKTIWEPAGIPKHQIITWMAVKQALPTIDKLSSRGMPLVNRCELCCIAAESHHHLFFQCPYAREVWQSILVWTGRTRRGWSLWHEMRWHYKNNKGKRW*

Click here to download the sequence:
Link to NCBI Protein BLAST