Transcript Information: S_Transcript_472842.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeOrtholog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value1.1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.11372571936863
Replicate 30.19013129983093
Condition 2: 8 Hour
Replicate 10.10992469235636
Replicate 20.11531880742127
Replicate 30.21975100623692
Condition 3: 24 Hour
Replicate 10
Replicate 20.2336475420242
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_472842.p1 GENE.S_Transcript_472842~~S_Transcript_472842.p1 ORF type:internal len:194 (+),score=14.10,RVT_1|PF00078.23|7.9e-30 S_Transcript_472842:2-580(+)
AGGAACCTTCATGATGTGAACAATACCAATATTGCTTTAATTCCCAAGGTGAAGAACCCTCGAAAAACTGGGGACTATAGGCCTATAAGTTTGTGTAATGTCATTATCAAGATCATCACTAAGACTCTTGCTAATAGACTTAAGTGTTTCCTACCTCAACTTGTGTCTGAAAATCGAAGTGCTTTCATCCCGAATCGGCTTATCACAGATAATGTCTTGGTGGCCTTCGAAATTTTCCATGCTATGAAGAGGAAGCGGAATGGTAAGAAAGGTTATATTGCCCTCAAGCTGGACATGAGTAAGGCATACGATAGGGTAGAGTGGCCTTTTCTTCGGCAATTGATGTTGCGGATGGGTTTTAGCTTGGCATGGGTGGAGCGTGTTATGAAGTGCGTGGAGAGCCCATCTTACTCTTTGTTGATCAATGGCAGCCCTCAAGGTAAGATTGTACCTTCTCGTGGCCTTCGTCAAGGGGACCCAATTTCCCCGTATCTCTTTATATTCATGGCATTAAAATCAGTAGGCAGGCGCCAGGTGTATCTCACTTATTATTTGCCGATGATAGTATACTATTTTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_472842.p1 GENE.S_Transcript_472842~~S_Transcript_472842.p1 ORF type:internal len:194 (+),score=14.10,RVT_1|PF00078.23|7.9e-30 S_Transcript_472842:2-580(+)
RNLHDVNNTNIALIPKVKNPRKTGDYRPISLCNVIIKIITKTLANRLKCFLPQLVSENRSAFIPNRLITDNVLVAFEIFHAMKRKRNGKKGYIALKLDMSKAYDRVEWPFLRQLMLRMGFSLAWVERVMKCVESPSYSLLINGSPQGKIVPSRGLRQGDPISPYLFIFMALKSVGRRQVYLTYYLPMIVYYFS

Click here to download the sequence:
Link to NCBI Protein BLAST