Transcript Information: S_Transcript_47288.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9752879552692
Replicate 22.0801426463454
Replicate 32.0533036161281
Condition 2: 8 Hour
Replicate 13.8501206189408
Replicate 23.2312399238923
Replicate 33.6132178989387
Condition 3: 24 Hour
Replicate 11.9500447649577
Replicate 22.1595407219188
Replicate 31.6949618607249


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47288.p1 GENE.S_Transcript_47288~~S_Transcript_47288.p1 ORF type:complete len:997 (+),score=94.76,RVT_1|PF00078.23|7e-40,Exo_endo_phos|PF03372.19|1.6e-14 S_Transcript_47288:2751-5741(+)
ATGGACGCCCTTCCAGTACCTCTTCACCTACCTCCTCTCCCCACCTCCACAATCCCCCCGGACTTGACAATATGTGCTGGGTCCCAGATGGAGGGCCCGGTGACTGCAGTGGCCCTGAAAATCTTTCACAAGCTGGAGATACACATGGATGTATTTCAAGAGCCACGACAGGCTCGACCCGAACTCCTTATTGATATTTCTATCCCACCAGGGATTTCCAGAATCATTAACATGATACGTGAAGTATACATGACATCCTTATCACATATACCGGTTTTAATGGAAGAGTCATATCCAAACTTTGCTCAACACACAACTCCTCTAAACGTGATGGTATGGAATACCCAAGGGGCAGAAAGCGCTGCTTTTCTTGCCACTTTGAAAGAGATTTTAAGAAGGAAAAAACCTTCGGTTATTGCCCTGGTGGAGACTCATCTAGATGGGGATAGGGCGACACGACTTGCTTCCCAAATCAACTACACAGGACACCTTAGGGTGGATGCACAAGGGTTCAGGGGAGGAATCTGGTTGTATTGGAAGCCTGAGCTGGTAAGGGTCAATCTTGTTTCCCAACACCCCCAGCACTTAACTGTGGAGGTCTCAAGAGCTGGTGAAGACCCTTGGTTCTTTTCCGCTGTCTATGCGAGCCCTGATCACACATCTCGCAGAGAACTATGGGAAGAATTAAGTCGGTTAGCCAGCACAATGAATCTTCCTTGGTTGTTGGCAGGGGATTTTAACGAGACTAGATCCCTCCAGGAGAGACATGGGGGTGATGCCCACATGCAACGACGTTGTGATGAATTCAATCACTGGATTGAAATTTGTGCTTTGATTGATCTGGGTTACGTGGGACCGAGTTATACTTGGGCTAGGGGTAACACACCGGAATCTCGCAAGTGGGCAAGGCTTGATCGGGGCCTTTGCAACCAAGCTTGGCGCATGCGTTTTGAAGAGGCCTCAGTTTTACATATGGTAGCCAACCAATCTGATCATTGTCCTCTACTCATTGCACCAAACGGCTTTGCTCCTATTGATCATCCGCAACGTCCTTTTCGTTTTTTAGCTTCTTGGATGACACATGAGAAATTTGAAGATTTTCTCTCTACCACATGGAATAATCAAGCCCCACTGGTACAAACTTTGGCAGATTTTGCTGATGCCTTGCTACAATGGAACAAAAACGTGTTTGGAAATATTTTTAGAAAGAAAAATCTTATCTGGGCACGTTTACTTGGGGTACAAAAGGCACTCTCGCAAGGAGGGCCCCGATACCTGTTGAAGAAAGAAGCGAAGCTGCGAAGAGACTTAGATGAGATATTGGCACAGGAGGAGAACTTATGGTACCAAAAATCAAGGCAGGAGGCCATTAGAGATGGAGATAGAAATACTAGGTATTATCACACCTCCACAATCATGAGAAGAAACAGAAACAGGATAGGAGCACTCAAGAATGATGAGGATGTTTGGATAACTGATCAAACACAGCTAAGAGAACATGTGAGAAACTACTACATACAGCTCTTCACACATGAGAACTCAGAGGAGCCCACTACCCCCTATCCCACCGACCTGTTTCCACCGATTCTATCTGGGGATTGGCATAACCTTTGTCGCCCTTACACTGAAAGTGATATCCTAGCAGCGCTAAAAGGCATGGGAGCTTATAAAGCACCTGGTCCGGACGGTTTCCAGGCACTATTTTTTCAACGAAACTGGGACAAGGTTAAAGACAGTGTGTGCAAAACAGTCTTGGACACCTTGGAGGGCAGAGAATTACCCCAGAAACTTAACGAAACTTTCTTGGTCTTGATACCTAAGGTGGATACCCCTGGGAGCATTAAGCAATTCCGTCCGATTGGCTTGTGCAATGTTATTTATAAATTAATTACCAAGACCATCGTGAACAGGATTAAACCCCTCTTGCCGAAGATGATTTCTCCTACACAATCAAGTTTCGTGCCAGGAAGACAGATCACGGACAATGTTATCATTGTGCAAGCAGTGCTTTACTCGCTACGCCAAAAGAAAGGGAGTAAGGGTTATATGGTAATTAAGATCGACTTGGAGAAGGCGTATGAACGCCTTCGGTGGGATTTCATAGACGAGACTCTAATGGATATGGGCCTCCCTATCCTCATGCGTGAAGTCATAATGCAGTGTGTCTCTACTTCCTCCATGCAGATTTTATGGAATGGCTCACCCACGGAAAAGTTTACACCATCCCGGGGGATTCGTCAGGGAGACCCCCTCTCCCCATATTTGTTTGTCATGTGCGTTGAAAGATTAAACCAACTCATTGAACAAGCAGTCAGAGAGGGTGCATGGAAACCAGTGAGATGTAATAGAGGTGGACCTCAAATTTCCAATCTGTTCACCGAAGACATGATACTCTTCGCTGAAGCCACTGTGGAGCAGGCCTTGGTTATTCAGAAATGTCTTCAGAACTTTTGTAGTGCTTCTGGACAAAAGGTTTCCAATGCAAAGTCCAAAATATTTTTCTCCCAGAACGTGGAGTCGGACATTGCGAATAGCATTGCAAGCACAATCGGCTTTGAGCGAACTGAGGATTTAGGGACTTACCTTGGAATGCCATTGATCAACGGAAGAGTGACTAAAGCGACCTACCAGCACATCATAGACAAGGTGGATCGTAAACTAAGTGGTTGGAAAGCAAGATGTTTATCTCTCGCAGGGAGGGCTACACTGGTTCAATCGGCCCTCTCATCTATTCCTTACTACTCCATGCAATCTGCGAAAATCCCGAGAACAACCTGTGATGAGATAGACCGAAAATCTCGAAGATTCCTGTGGGGTGGCGATGAAGATCACTCCCGCATCCATTTGGTGAAATGCAACCAAGTGCAAAGGGCGAAGAACGAGGGAGGGCTTGGTTTGCGTAGCATGAGACAAGCCAATGCTGCCTTTTTAATCAAGCTTGGATGGCGGGTCCTAACAGAACCAAACTCCTTGTGGTCAAGCGTTCTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47288.p1 GENE.S_Transcript_47288~~S_Transcript_47288.p1 ORF type:complete len:997 (+),score=94.76,RVT_1|PF00078.23|7e-40,Exo_endo_phos|PF03372.19|1.6e-14 S_Transcript_47288:2751-5741(+)
MDALPVPLHLPPLPTSTIPPDLTICAGSQMEGPVTAVALKIFHKLEIHMDVFQEPRQARPELLIDISIPPGISRIINMIREVYMTSLSHIPVLMEESYPNFAQHTTPLNVMVWNTQGAESAAFLATLKEILRRKKPSVIALVETHLDGDRATRLASQINYTGHLRVDAQGFRGGIWLYWKPELVRVNLVSQHPQHLTVEVSRAGEDPWFFSAVYASPDHTSRRELWEELSRLASTMNLPWLLAGDFNETRSLQERHGGDAHMQRRCDEFNHWIEICALIDLGYVGPSYTWARGNTPESRKWARLDRGLCNQAWRMRFEEASVLHMVANQSDHCPLLIAPNGFAPIDHPQRPFRFLASWMTHEKFEDFLSTTWNNQAPLVQTLADFADALLQWNKNVFGNIFRKKNLIWARLLGVQKALSQGGPRYLLKKEAKLRRDLDEILAQEENLWYQKSRQEAIRDGDRNTRYYHTSTIMRRNRNRIGALKNDEDVWITDQTQLREHVRNYYIQLFTHENSEEPTTPYPTDLFPPILSGDWHNLCRPYTESDILAALKGMGAYKAPGPDGFQALFFQRNWDKVKDSVCKTVLDTLEGRELPQKLNETFLVLIPKVDTPGSIKQFRPIGLCNVIYKLITKTIVNRIKPLLPKMISPTQSSFVPGRQITDNVIIVQAVLYSLRQKKGSKGYMVIKIDLEKAYERLRWDFIDETLMDMGLPILMREVIMQCVSTSSMQILWNGSPTEKFTPSRGIRQGDPLSPYLFVMCVERLNQLIEQAVREGAWKPVRCNRGGPQISNLFTEDMILFAEATVEQALVIQKCLQNFCSASGQKVSNAKSKIFFSQNVESDIANSIASTIGFERTEDLGTYLGMPLINGRVTKATYQHIIDKVDRKLSGWKARCLSLAGRATLVQSALSSIPYYSMQSAKIPRTTCDEIDRKSRRFLWGGDEDHSRIHLVKCNQVQRAKNEGGLGLRSMRQANAAFLIKLGWRVLTEPNSLWSSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST