Transcript Information: S_Transcript_47288.p3


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value4E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0636618652521
Replicate 23.5009815764919
Replicate 33.2578485896181
Condition 2: 8 Hour
Replicate 14.8524840242578
Replicate 25.7604161168158
Replicate 35.169412143723
Condition 3: 24 Hour
Replicate 13.9896344099588
Replicate 22.849940377864
Replicate 33.3226645324105


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47288.p3 GENE.S_Transcript_47288~~S_Transcript_47288.p3 ORF type:complete len:334 (+),score=48.87,RVT_3|PF13456.2|4e-19,zf-RVT|PF13966.2|9.3e-07,zf-RVT|PF13966.2|1.6e+04 S_Transcript_47288:6196-7197(+)
ATGGAGAGTCAAAGCACCACAAAGAGTCCGAATGTTTATTTGGCTTGTTCTAAATGGGAGGGTCTTGACCAATGCACACACCGAGTAGCTAGAGACATGACAAATGACCCTAGCTGCAAGGTTTGTGAAGCACCTGAGGAGACTATTGACCACATTCTACGGCACTGTACCCTGGCCCGAAATCTTTGGTTAAGGCTGGGAGCACACTATGAACCGGATTTCATGTCCATGCCTGTGAAACTTTGGGTAGCCTCCAATCTTGATCCCACAAACCCCATTCGGAATGATAAGTGGCCAACAGCTTTTGCCATAACATTATGGTGGCTTTGGAAATGGCGCAATTGCCATGTCTTTGATAGACCGGAGGATATACCGAACGACCCTTTGAAGTTTTTGCGAGCAAGAATTGCAGAAACTAAAAAGGCAATGGACAGGGATGAGATATTTCATGGCCAGGCACAAGCTCGACGCGAAGAAGTCATGATACAGTGGACACCACCAGCGGAGGGGTGGATATTACTCAACACTGATGGTGCTGCTAAAGGCAATCCTGGTATGGCAGGCGGAGGGAGCTTGCTGCGTGATCATAGGGGCCAACTCCTGGAAGCTTTCTCATGCCGGTGGGGAAATTGTACATCAGTACAGGCAGAGCTCCTAGCTTTGTGGACGGGATTGAAAATGGCCCGAGAAAAGAACATCCCCAGACTGATTGTTAAGGTGGACTCCCAAGTGGTTCTACAAATGTTGGATAAGGAACCTAGTGAAGTGTGCTGCTATCGGGCTCTGGTGAAACAATGCAAAGAGCTGTTGGAGATGACTGACTGGCAAACTCGTGTTCAACACTGTTTCAGGGAGGCAAACAGGGCGGCGGACTGGCTTGCAAACTTGGGTGTGACGCAGACTATGGTTGAGCAAAGGTTCTCTTCTTCTGTAGGTGAGCTAGGATCCATCATCAATGAGGACTTTAGGGGGGTTTCCTTCCCACGTAGGATCTTACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47288.p3 GENE.S_Transcript_47288~~S_Transcript_47288.p3 ORF type:complete len:334 (+),score=48.87,RVT_3|PF13456.2|4e-19,zf-RVT|PF13966.2|9.3e-07,zf-RVT|PF13966.2|1.6e+04 S_Transcript_47288:6196-7197(+)
MESQSTTKSPNVYLACSKWEGLDQCTHRVARDMTNDPSCKVCEAPEETIDHILRHCTLARNLWLRLGAHYEPDFMSMPVKLWVASNLDPTNPIRNDKWPTAFAITLWWLWKWRNCHVFDRPEDIPNDPLKFLRARIAETKKAMDRDEIFHGQAQARREEVMIQWTPPAEGWILLNTDGAAKGNPGMAGGGSLLRDHRGQLLEAFSCRWGNCTSVQAELLALWTGLKMAREKNIPRLIVKVDSQVVLQMLDKEPSEVCCYRALVKQCKELLEMTDWQTRVQHCFREANRAADWLANLGVTQTMVEQRFSSSVGELGSIINEDFRGVSFPRRILL*

Click here to download the sequence:
Link to NCBI Protein BLAST