Transcript Information: S_Transcript_47306.p1


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value2.9E-162
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.573318658762
Replicate 221.016014870479
Replicate 317.769643525805
Condition 2: 8 Hour
Replicate 116.422107142026
Replicate 214.53353670756
Replicate 315.714602978855
Condition 3: 24 Hour
Replicate 122.402964455682
Replicate 223.821816547402
Replicate 315.648713682006


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47306.p1 GENE.S_Transcript_47306~~S_Transcript_47306.p1 ORF type:complete len:274 (+),score=46.04,Peptidase_S10|PF00450.18|3.8e-52 S_Transcript_47306:1021-1842(+)
ATGTTCAAGTTTAACTTGAAAGGAGTTGCTATAGGGAATCCACTTCTCAAACTTGATCGAGATATTCCAGCAGCGTATGAATACTTCTGGTCACACGGAATGATTTCTGATGAAGTTGGTCTTGCCATCATGAATCAATGTGATTTTGAAGATTACTCCTTTGAAAGCCCACACAATGAATCTGAGGCTTGCAATATTGCAATAAGACAAGCAAACAACATTGTTGGTGCCTTTGTTAACACATATGATGTGCTTCTTGATGTCTGTTATCCTGACATTGTGAACCAAGAGCTTCGGTTGCGAAAAATGGCTACTAAAATGAGTCTAGGGGTTGATGTATGCATGAGTTTTGAGAGGAAATTCTATTTTAATCTTCCTGAGGTACAGAAGGCTCTCCACGCTAATAGGACCAATCTGCCGTATGAATGGTCCATGTGCAGTGACATTCTCAATTACAATGATACTGATGGGAACTTGGATATGCTTCCCCTGATTAAAAGGATTCTCCGACATGGTATTCCTGTTTGGGTTTTCAGTGGAGATCAAGATTCCGTTGTACCACTACTAGGATCACGTACCCTTGTACGTGAGCTTGCACATGACCTCAAGTTCAAGATCACTGTCCCCTATGGAGCTTGGTTTCACAAAAAGCAGGTAGGAGGTTGGGCTACTGAATATGGAAATTTATTGACATTTGCGACTGTGAAGGGTGCTGCACATATGGTACCTTATTCGCAGCCATCAAGGGCTTTGCATCTCTTTAGTTCCTTTGTTGGAGGGCGAAGATTACCAAGTACAACCAAACTGCCCGGAGATAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47306.p1 GENE.S_Transcript_47306~~S_Transcript_47306.p1 ORF type:complete len:274 (+),score=46.04,Peptidase_S10|PF00450.18|3.8e-52 S_Transcript_47306:1021-1842(+)
MFKFNLKGVAIGNPLLKLDRDIPAAYEYFWSHGMISDEVGLAIMNQCDFEDYSFESPHNESEACNIAIRQANNIVGAFVNTYDVLLDVCYPDIVNQELRLRKMATKMSLGVDVCMSFERKFYFNLPEVQKALHANRTNLPYEWSMCSDILNYNDTDGNLDMLPLIKRILRHGIPVWVFSGDQDSVVPLLGSRTLVRELAHDLKFKITVPYGAWFHKKQVGGWATEYGNLLTFATVKGAAHMVPYSQPSRALHLFSSFVGGRRLPSTTKLPGDN*

Click here to download the sequence:
Link to NCBI Protein BLAST