Transcript Information: S_Transcript_47306.p2


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value4E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.248677379232
Replicate 27.2111841355301
Replicate 37.032638662229
Condition 2: 8 Hour
Replicate 15.4765593810536
Replicate 26.441699608326
Replicate 34.8935214346066
Condition 3: 24 Hour
Replicate 16.5449650925127
Replicate 26.790324869178
Replicate 34.1218905253497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47306.p2 GENE.S_Transcript_47306~~S_Transcript_47306.p2 ORF type:5prime_partial len:257 (+),score=45.99,Peptidase_S10|PF00450.18|9.8e-63 S_Transcript_47306:2-772(+)
AATCACGTGCTTTCTCAGTCACTCTCACAGCACATTTCACTTTACTCCACTTCTATCACTTTTAGGGGGGAAAAACGAAAAACAAGAAGTATATCTCATCCCACCTCTTCAAAAACATCATTTTTGGGGCGTGAAGAAGTAGTCATGGGCAACCAGGGTGGCTCATGGTGGTGGTGCGTGTTTGTGGTGGTGGCTGTGGTGGTTAATTATGGTGCGAAGGCTAAGGGATACCCAATGGAGGACCTTGTGGTAAAATTACCTGGGCAACCAAAGGTTGGGTTCAGACAATTTTCTGGGTATATTGATGTGGATGTTAAGGCTGGCAGGAGTTTGTTTTACTATTTTGTTGAAGCTGATGGAAAACCTAACCATAAACCCCTCACCCTTTGGCTCAATGGAGGTCCAGGTTGCTCCTCCATGGGTGGTGGTGCTTTTACAGAATTGGGTCCATTCTTCCCTAGAGGCGATGGCAGAGGCCTTCGGAGAAATTCAATGTCATGGAACAAAGTATCGAATCTTCTCTTTGTTGAGTCGCCAGCTGGAGTAGGATGGTCATATTCAAACACAACATCTGATTATAACACTGGGGATGCCTCTTCCGCAAAAGACATGCTGACATTTCTGCTGAATTGGTTTGAGAAGTTCCCTGAATTCGAATCTAGGGAGTTGTTCTTTACTGGAGAGAGCTATGCAGGTTTGTATTGGTTCAAGCGTTACTTTTGCATCTTCATTAATCACCAAGTGGCATTTTACTGTGGAAAATTTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47306.p2 GENE.S_Transcript_47306~~S_Transcript_47306.p2 ORF type:5prime_partial len:257 (+),score=45.99,Peptidase_S10|PF00450.18|9.8e-63 S_Transcript_47306:2-772(+)
NHVLSQSLSQHISLYSTSITFRGEKRKTRSISHPTSSKTSFLGREEVVMGNQGGSWWWCVFVVVAVVVNYGAKAKGYPMEDLVVKLPGQPKVGFRQFSGYIDVDVKAGRSLFYYFVEADGKPNHKPLTLWLNGGPGCSSMGGGAFTELGPFFPRGDGRGLRRNSMSWNKVSNLLFVESPAGVGWSYSNTTSDYNTGDASSAKDMLTFLLNWFEKFPEFESRELFFTGESYAGLYWFKRYFCIFINHQVAFYCGKFG*

Click here to download the sequence:
Link to NCBI Protein BLAST