Transcript Information: S_Transcript_473084.p1


Annotated TAIR IDAT5G48130.1
Annotated Gene NamePhototropic-responsive NPH3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19516291-19518450 | Forward length=625
E-Value3.3E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38292088108173
Replicate 20.15872510473032
Replicate 30.066340777279139
Condition 2: 8 Hour
Replicate 10.15342007422398
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.078578717592065
Replicate 20.081524502073192
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_473084.p1 GENE.S_Transcript_473084~~S_Transcript_473084.p1 ORF type:3prime_partial len:278 (+),score=37.79,NPH3|PF03000.10|2.4e+03,NPH3|PF03000.10|5.7e-09,BTB|PF00651.27|1.8e-05 S_Transcript_473084:241-1071(+)
ATGGAAGCTTTGAGCCCTAGAGATTCTTCCGTTCTATCTAGTCCTTACTCTTCGCCGAATCTCAGCGCACTACTTAAGATCAAGATCATTTCATGGAGCCAGGAGACAGGACTACCAGTAACTGTTCGTGTTCGAGTTGCTGATAAATCTTTCAACTTACACAAGTTTCCACTGAAGGCAAAAAGCGGATACTTCAAGAGGCAATTAAGTGAATGGCAAGAGGTTGATCTGCCAGGAAACTTCCCAGGAGGTTCAGAGACATTTGAGATGATTGCGCTGTTCATCTATGGTTCCTCGACCTTTATTGACCCCTTCAATGTCGCTTCCCTTAGGTGTGCAGCAGAATTTCTAGAGATGTCAGAAACTTATTGCTCTGGAAACCTCTGTGATAGAACAGACCTTTACTTAAACCAAGTGGTATTACAATCTTGGGATGATACCCTAATTGTCCTCCAAAAATGCCAAACCTTACTCCCTTGGTCCGAGGACCTTCTCATTGTGAGTCGCTGTATTGAATCCCTTGCCTTTATGGCTTGTATGGAAATTCTTGACCCCGAGAGGAAAAGATCAGACCGACCAGTTATGTCTTTGGAAGCACTAGCTAGCCAACCTTGGAGTAGCCAAGTAGTGAAGGAGATCATTTCTCAAGATCTTTGGATCAAAGATCTTATTGCTTTGCCATTCAGATTCTTCAAAAGGATTGTTGGGTCCTTAAGAAGACAAGGAATGAAAGAGAAATATGTCGGCCCTATCATTGTTTTCTATGCCACCAAATGGGTTCTCTTAAAGAAGACAAGACAGTTTTGGGAATGTCTGTGTGATGATGATGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_473084.p1 GENE.S_Transcript_473084~~S_Transcript_473084.p1 ORF type:3prime_partial len:278 (+),score=37.79,NPH3|PF03000.10|2.4e+03,NPH3|PF03000.10|5.7e-09,BTB|PF00651.27|1.8e-05 S_Transcript_473084:241-1071(+)
MEALSPRDSSVLSSPYSSPNLSALLKIKIISWSQETGLPVTVRVRVADKSFNLHKFPLKAKSGYFKRQLSEWQEVDLPGNFPGGSETFEMIALFIYGSSTFIDPFNVASLRCAAEFLEMSETYCSGNLCDRTDLYLNQVVLQSWDDTLIVLQKCQTLLPWSEDLLIVSRCIESLAFMACMEILDPERKRSDRPVMSLEALASQPWSSQVVKEIISQDLWIKDLIALPFRFFKRIVGSLRRQGMKEKYVGPIIVFYATKWVLLKKTRQFWECLCDDDG

Click here to download the sequence:
Link to NCBI Protein BLAST