Transcript Information: S_Transcript_47315.p1


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value6.2E-264
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1397361007797
Replicate 21.776591668489
Replicate 32.5211980039379
Condition 2: 8 Hour
Replicate 12.6357223987468
Replicate 23.8962208305142
Replicate 33.2333027265983
Condition 3: 24 Hour
Replicate 12.6590213986678
Replicate 21.952313356764
Replicate 32.1726854730999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47315.p1 GENE.S_Transcript_47315~~S_Transcript_47315.p1 ORF type:complete len:534 (+),score=96.70,Peptidase_S10|PF00450.18|7.7e-127 S_Transcript_47315:236-1603(+)
ATGGAGGACCTTGTGGTAAAATTACCTGGGCAACCAAAGGTTGGGTTCAGACAATTTTCTGGGTATATTGATGTGGATGTTAAGGCTGGCAGGAGTTTGTTTTACTATTTTGTTGAAGCTGATGGAAAACCTAACCATAAACCCCTCACCCTTTGGCTCAATGGAGGTCCAGGTTGCTCCTCCATGGGTGGTGGTGCTTTTACAGAATTGGGTCCATTCTTCCCTAGAGGCGATGGCAGAGGCCTTCGGAGAAATTCAATGTCATGGAACAAAGTATCGAATCTTCTCTTTGTTGAGTCGCCAGCTGGAGTAGGATGGTCATATTCAAACACAACATCTGATTATAACACTGGGGATGCCTCTTCCGCAAAAGACATGCTGACATTTCTGCTGAATTGGTTTGTGAAGTTCCCTGAATTCAAATCTAGGGATCTGTTCTTTACTGGAGAGAGCTATGCAGGCCACTACATACCAGAATTAGCTATCGCAGTGTTGGATCATAATGCTGATTCCAGACAGTTCAAGTTTAACTTGAAAGGAGTTGCTATAGGGAATCCACTTCTCAAACTTGATCGAGATATTCCAGCAGCGTATGAATACTTCTGGTCACACGGAATGATTTCTGATGAAGTTGGTCTTGCCATCATGAATCAATGTGATTTTGAAGATTACTCCTTTGAAAGCCCACACAATGAATCTGAGGCTTGCAATATTGCAATAAGACAAGCAAACAACATTGTTGGTGCCTTTGTTAACACATATGATGTGCTTCTTGATGTCTGTTATCCTGACATTGTGAACCAAGAGCTTCGGTTGCGAAAAATGGCTACTAAAATGAGTCTAGGGGTTGATGTATGCATGAGTTTTGAGAGGAAATTCTATTTTAATCTTCCTGAGGTACAGAAGGCTCTCCACGCTAATAGGACCAATCTGCCGTATGAATGGTCCATGTGCAGTGACATTCTCAATTACAATGATACTGATGGGAACTTGGATATGCTTCCCCTGATTAAAAGGATTCTCCGACATGGTATTCCTGTTTGGGTTTTCAGCGGAGATCAGGATACTAGTGTACCTTTCATGGGAACACGTACCCTTGTACGTGAGCTTGCTGAGGAACTCAACTTTAAGATGACTGTCCCATATGGAGCTTGGTTTCACAAGAAACAGGTCGCTGGTTGGGCAACTGAATATGGAGGTTTACTGACATTTGCGACTGTGAAGGGTGGTGCACATGAGGTAGTATACTCGCAGCCATCAAGGGCTTTGTATCTTTTTAGTTCCTTTGTTCGAGGGCGAAGATTACCAAGTACTGCCAAGTTGCCGGAGATAACTAAGGTTTCCTCTTTATTCATTTCAGGATTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47315.p1 GENE.S_Transcript_47315~~S_Transcript_47315.p1 ORF type:complete len:534 (+),score=96.70,Peptidase_S10|PF00450.18|7.7e-127 S_Transcript_47315:236-1603(+)
MEDLVVKLPGQPKVGFRQFSGYIDVDVKAGRSLFYYFVEADGKPNHKPLTLWLNGGPGCSSMGGGAFTELGPFFPRGDGRGLRRNSMSWNKVSNLLFVESPAGVGWSYSNTTSDYNTGDASSAKDMLTFLLNWFVKFPEFKSRDLFFTGESYAGHYIPELAIAVLDHNADSRQFKFNLKGVAIGNPLLKLDRDIPAAYEYFWSHGMISDEVGLAIMNQCDFEDYSFESPHNESEACNIAIRQANNIVGAFVNTYDVLLDVCYPDIVNQELRLRKMATKMSLGVDVCMSFERKFYFNLPEVQKALHANRTNLPYEWSMCSDILNYNDTDGNLDMLPLIKRILRHGIPVWVFSGDQDTSVPFMGTRTLVRELAEELNFKMTVPYGAWFHKKQVAGWATEYGGLLTFATVKGGAHEVVYSQPSRALYLFSSFVRGRRLPSTAKLPEITKVSSLFISGF*

Click here to download the sequence:
Link to NCBI Protein BLAST