Transcript Information: S_Transcript_47317.p1


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value3.7E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1300637467168
Replicate 24.6842440674129
Replicate 33.2891503843364
Condition 2: 8 Hour
Replicate 12.1280113479942
Replicate 20.90247372432018
Replicate 31.6292367596164
Condition 3: 24 Hour
Replicate 12.1334705744529
Replicate 23.2720577222752
Replicate 31.9813495604868


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47317.p1 GENE.S_Transcript_47317~~S_Transcript_47317.p1 ORF type:5prime_partial len:471 (+),score=84.41,Peptidase_S10|PF00450.18|2.9e-112 S_Transcript_47317:2-1414(+)
AATCACGTGCTTTCTCAGTCACTCTCACAGCACATTTCACTTTACTCCACTTCTATCACTTTTAGGGGGGAAAAACGAAAAACAAGAAGTATATCTCATCCCACCTCTTCAAAAACATCATTTTTGGGGCGTGAAGAAGTAGTCATGGGCAACCAGGGTGGCTCATGGTGGTGGTGCGTGTTTGTGGTGGTGGCTGTGGTGGTTAATTATGGTGCGAAGGCTAAGGGATACCCAATGGAGGACCTTGTGGTAAAATTACCTGGGCAACCAAAGGTTGGGTTCAGACAATTTTCTGGGTATATTGATGTGGATGTTAAGGCTGGCAGGAGTTTGTTTTACTATTTTGTTGAAGCTGATGGAAAACCTAACCATAAACCCCTCACCCTTTGGCTCAATGGAGGTCCAGGTTGCTCCTCCATGGGTGGTGGTGCTTTTACAGAATTGGGTCCATTCTTCCCTAGAGGCGATGGCAGAGGCCTTCGGAGAAATTCAATGTCATGGAACAAAGTATCGAATCTTCTCTTTGTTGAGTCGCCAGCTGGAGTAGGATGGTCATATTCAAACACAACATCTGATTATAACACTGGGGATGCCTCTTCCGCAAAAGACATGCTGACATTTCTGCTGAATTGGTTTGTGAAGTTCCCTGAATTCAAATCTAGGGATCTGTTCTTTACTGGAGAGAGCTATGCAGGCCACTACATACCAGAATTAGCTATCGCAGTGTTGGATCATAATGCTGATTCCAGACAGTTCAAGTTTAACTTGAAAGGAGTTGCTATAGGGAATCCACTTCTCAAACTTGATCGAGATATTCCAGCAGCGTATGAATACTTCTGGTCACACGGAATGATTTCTGATGAAGTTGGTCTTGCCATCATGAATCAATGTGATTTTGAAGATTACTCCTTTGAAAGCCCACACAATGAATCTGAGGCTTGCAATATTGCAATAAGACAAGCAAACAACATTGTTGGTGCCTTTGTTAACACATATGATGTGCTTCTTGATGTCTGTTATCCTGACATTGTGAACCAAGAGCTTCGGTTGCGAAAAATGGCTACTAAAATGAGTCTAGGGGTTGATGTATGCATGAGTTTTGAGAGGAAATTCTATTTTAATCTTCCTGAGGTACAGAAGGCTCTCCACGCTAATAGGACCAATCTGCCGTATGAATGGTCCATGTGCAGTGACATTCTCAATTACAATGATACTGATGGGAACTTGGATATGCTTCCCCTGATTAAAAGGATTCTCCGACATGGTATTCCTGTTTGGGTTTTCAGTGGAGATCAAGATTCCGTTGTACCACTACTAGGATCACGTACCCTTGTACGTGAGCTTGCACATGACCTCAAGTTCAAGATCACTGTCCCCTATGGAGCTTGGTTTCACAAAAAGCAGGTATTATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47317.p1 GENE.S_Transcript_47317~~S_Transcript_47317.p1 ORF type:5prime_partial len:471 (+),score=84.41,Peptidase_S10|PF00450.18|2.9e-112 S_Transcript_47317:2-1414(+)
NHVLSQSLSQHISLYSTSITFRGEKRKTRSISHPTSSKTSFLGREEVVMGNQGGSWWWCVFVVVAVVVNYGAKAKGYPMEDLVVKLPGQPKVGFRQFSGYIDVDVKAGRSLFYYFVEADGKPNHKPLTLWLNGGPGCSSMGGGAFTELGPFFPRGDGRGLRRNSMSWNKVSNLLFVESPAGVGWSYSNTTSDYNTGDASSAKDMLTFLLNWFVKFPEFKSRDLFFTGESYAGHYIPELAIAVLDHNADSRQFKFNLKGVAIGNPLLKLDRDIPAAYEYFWSHGMISDEVGLAIMNQCDFEDYSFESPHNESEACNIAIRQANNIVGAFVNTYDVLLDVCYPDIVNQELRLRKMATKMSLGVDVCMSFERKFYFNLPEVQKALHANRTNLPYEWSMCSDILNYNDTDGNLDMLPLIKRILRHGIPVWVFSGDQDSVVPLLGSRTLVRELAHDLKFKITVPYGAWFHKKQVL*

Click here to download the sequence:
Link to NCBI Protein BLAST