Transcript Information: S_Transcript_473255.p4


Annotated TAIR IDAT5G24880.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8552743-8554074 | Forward length=443
E-Value0.0002
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.10966592470454
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.2472749451482


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_473255.p4 GENE.S_Transcript_473255~~S_Transcript_473255.p4 ORF type:complete len:204 (-),score=28.15 S_Transcript_473255:4208-4819(-)
ATGTACGAACAACCCAGCATGAAGGCTACACCCAGTAGAAAGGAAGGAACCGTGAGGAGAAGGCTAATAATGGAAGAAGAGGGCCTCACTCCATCCAAGCATGTGGAGGAGGAAGAAATCACCACCAGCAAGGGAAAGAAAATGGCTAGATCCGAGTCGGTCACCTCGACCAGGGAACCAACAAAAGTCTACGGACTAGAAAAGAAACAGAGGTTGCGAGAAGCCTCCCAAAAAACCGAGGGAAAAGGTAAAAAGTCACAGCCCAGTGGTCAAGAGGAAGAGGTTGCTAAATCTGCATCCCAAAGTCCAAGCCCTCAGTATAACAGCAGACCCGTCACCATGTCCGTAGGGGTGGCCGCGAAGGATGCCAAAGGAGAAGGAAAGGAAATCAGCAGCAAAGGCAAGATTCCCATAGCCGTAAAATCGCCTTTTACGGTCGAAGTCCTCCAGACCCCGGTACCACCAAAAATAAAGCTCCCAGAGATCACATACGATGGAAAGACTGACCCGGACGACTTTCTGGCACAATTCAGGGCAAGGATGTACCTCACCCCCATGGAGGAAGGAGTTTGGTGCAAATGCTTCCCAGCACTCCTTACTAGAGTCGCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_473255.p4 GENE.S_Transcript_473255~~S_Transcript_473255.p4 ORF type:complete len:204 (-),score=28.15 S_Transcript_473255:4208-4819(-)
MYEQPSMKATPSRKEGTVRRRLIMEEEGLTPSKHVEEEEITTSKGKKMARSESVTSTREPTKVYGLEKKQRLREASQKTEGKGKKSQPSGQEEEVAKSASQSPSPQYNSRPVTMSVGVAAKDAKGEGKEISSKGKIPIAVKSPFTVEVLQTPVPPKIKLPEITYDGKTDPDDFLAQFRARMYLTPMEEGVWCKCFPALLTRVA*

Click here to download the sequence:
Link to NCBI Protein BLAST