Transcript Information: S_Transcript_473298.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.17510150442472
Replicate 30.14637092129842
Condition 2: 8 Hour
Replicate 10
Replicate 20.35510870856709
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.3597430408944
Replicate 30.20017495559616


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_473298.p1 GENE.S_Transcript_473298~~S_Transcript_473298.p1 ORF type:complete len:126 (+),score=17.87 S_Transcript_473298:225-602(+)
ATGCTCCTTTTGATCATGTTGATAAGTGGTGTTTTCTTGATGGGTAATGATGCTCAATGCAAGATTTTTGGTATTGGTTCAATTCAAATCAAGACCCATAACAATTGCATTAGGACTCTCACCAATGTTCGTTATCTTCCTGATGTAACTCGTAATTTAATCTCTCTTGGCACTCTTGAGTCACTTGGCTACAGGTGCACAACCAAAGGTAGAGTTTTAAAGATTTCTTCAGGGGCCCGAACAATTATGAAAGCAAATCGTGTGGGGAGCCCATATGTTTTGCAAGGCTCTATTGTGACGAGTACTGCAGCTGTTTCATCATCATCTGTCCCTAATTCTGAGAACACTCAGTTATGGCACATGTGTCTGGCCATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_473298.p1 GENE.S_Transcript_473298~~S_Transcript_473298.p1 ORF type:complete len:126 (+),score=17.87 S_Transcript_473298:225-602(+)
MLLLIMLISGVFLMGNDAQCKIFGIGSIQIKTHNNCIRTLTNVRYLPDVTRNLISLGTLESLGYRCTTKGRVLKISSGARTIMKANRVGSPYVLQGSIVTSTAAVSSSSVPNSENTQLWHMCLAI*

Click here to download the sequence:
Link to NCBI Protein BLAST