Transcript Information: S_Transcript_47371.p1


Annotated TAIR IDAT1G02560.1
Annotated Gene Namenuclear encoded CLP protease 5
Annotated Gene Symbol(s)CLPP5, NCLPP5, NCLPP1
Annotation TypeOrtholog
Chromosome Positionchr1:538000-539805 | Forward length=298
E-Value4.2E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1180.67874307966
Replicate 2192.48658236403
Replicate 3200.42361152076
Condition 2: 8 Hour
Replicate 1181.1207470132
Replicate 2179.35526273414
Replicate 3197.64285908564
Condition 3: 24 Hour
Replicate 1170.67244006087
Replicate 2171.90578168454
Replicate 3167.97538416741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47371.p1 GENE.S_Transcript_47371~~S_Transcript_47371.p1 ORF type:complete len:294 (+),score=65.39,CLP_protease|PF00574.19|6.6e-80 S_Transcript_47371:58-939(+)
ATGGCACACTCCTGTGTATCTTTACACTCTTCAACAACCCTTAAACTCAACAAAACTCTTGTAATTGACTCTCATTTCTCTTCTCACTCTCACTTTCTCTCTCTTCCTTTCAAACCCCTCTCTCTCTCTCCCAGGGTTTTGAGAGCTCGTCGAAGCTCCAAAGTCAAAGCTCTTTACTCCGATGGATTTGGCACTACTCGCTCCGGCATTTGGTCCATCAGAGATGATTTGGCGGTGCCATCTTCGCCCTACTTTCCTGCTTATGCGCAAGGGCAAGGACCCCCACCTATGGTTCAAGAGAGGTTCCAGAGTGTCATTACTCAGCTCTTTCAATATAGAATTATTCGATGTGGTGGAGCAGTCGATGATGATATGGCTAACATAATTGTGGCTCAACTTCTCTATCTTGATGCTGTTGATCCTACCAAGGACATTGTCATGTATGTGAATTCACCTGGAGGGTCAGTTACAGCTGGTATGGCAATATTTGACACCATGAGGCACATTCGGCCTGATGTCTCCACTGTTTGTGTTGGACTGGCAGCAAGTATGGGTGCTTTCCTTCTTAGTGCTGGCACCAAAGGGAAAAGGTATAGCTTGCCTAATTCAAGGATTATGATCCATCAACCTCTGGGTGGTGCACAGGGTGGTCAAACAGATATAGACATTCAGGCAAATGAGATGCTCCACCACAAGGCTAACCTCAATGGGTATCTGGCTTACCACACTGGTCAGAGCCTGGAGAAGATCAACCAAGACACTGACCGTGACTTCTTCATGAGTGCTAAAGAAGCCAAAGAGTATGGCCTCATTGATGGTGTCATCATGAACCCACTAAAAGCTCTACAGCCACTAGCTGCCACTGCTGATCAGGCATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47371.p1 GENE.S_Transcript_47371~~S_Transcript_47371.p1 ORF type:complete len:294 (+),score=65.39,CLP_protease|PF00574.19|6.6e-80 S_Transcript_47371:58-939(+)
MAHSCVSLHSSTTLKLNKTLVIDSHFSSHSHFLSLPFKPLSLSPRVLRARRSSKVKALYSDGFGTTRSGIWSIRDDLAVPSSPYFPAYAQGQGPPPMVQERFQSVITQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKALQPLAATADQAS*

Click here to download the sequence:
Link to NCBI Protein BLAST