Transcript Information: S_Transcript_473849.p1


Annotated TAIR IDAT3G24110.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8704429-8705413 | Reverse length=229
E-Value3.5E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8967922272732
Replicate 23.7947998038926
Replicate 32.5082121073697
Condition 2: 8 Hour
Replicate 14.3503796246951
Replicate 24.4743697279453
Replicate 34.0926427401564
Condition 3: 24 Hour
Replicate 12.2718678830218
Replicate 21.9037601724132
Replicate 34.136415282439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_473849.p1 GENE.S_Transcript_473849~~S_Transcript_473849.p1 ORF type:complete len:250 (+),score=51.80,EF-hand_1|PF00036.28|9.8e-05,EF-hand_1|PF00036.28|0.0013,EF-hand_1|PF00036.28|0.0002,EF-hand_1|PF00036.28|0.00013,EF-hand_6|PF13405.2|0.00023,EF-hand_6|PF13405.2|0.0086,EF-hand_6|PF13405.2|0.00027,EF-hand_6|PF13405.2|0.0059,EF-hand_7|PF13499.2|6.7e-10,EF-hand_7|PF13499.2|1.7e-06,EF-hand_8|PF13833.2|4.9,EF-hand_8|PF13833.2|4.3e-08,EF-hand_8|PF13833.2|0.31,EF-hand_8|PF13833.2|0.00035,EF-hand_5|PF13202.2|0.082,EF-hand_5|PF13202.2|0.63,EF-hand_5|PF13202.2|0.075,EF-hand_5|PF13202.2|0.015,SPARC_Ca_bdg|PF10591.5|3.2e+03,SPARC_Ca_bdg|PF10591.5|0.0054,SPARC_Ca_bdg|PF10591.5|0.66 S_Transcript_473849:246-995(+)
ATGAAAATGAAAATGAAGATCAAGTCCTACTTGACAGGCTGCTTGCTTTGTGGTCGTAAGCTTAATGATACAAACACAGACAAATATAAAAGGTTGGACGCCAAATTGGAAAGGAAAATGTTGGAGCTCAGAAGAATAAGAGCTTCAGCCCATAAAAATCTAAGAACAATTAATAGTATTATCATCAAGTTTCCTCGCTTGAAACAAGATATCAGAAACCTCAGAGGTGTCTTCGAGCATTATGATGAAGACTGCAACGGAATTATTGATCGCGAGGAGCTTGAGAAATGCTTCAAGGAATTGCAAGTCAATGATCTTAAAGAGCAGGAGATTGATGATCTTTTTCACTCTTGTGACGTTGATAGGAGTGGGGGAATACAATTCAATGAGTTCATTGTTCTCCTCTGCCTCATTTACCTCCTCCATAAACAACCTGATTCCCGCTCTTCTGCTGACACTACGTTGTCGTCAAGGTTGGGATCGCCTCAGCTGGAACCAACCTTTGACACAATCGTGGAAGCTTTCTTTTATATGGATAAAAATGGGGATGGTAAACTCAACAAAAAAGACATGGTCATGGCTTTGAAAGATGCTCCTTGGGAGAAATCACCTGCACATGTCACCAACACCAGATTCATGGAGATGGACAGGGACAAAGACGGGAATGTCAGTTTCAGGGAGTTTCTTTTCGCTTTAACTAGTTGGCTTGGGATCGAGTCTGATGATGACATTCCTGTTACTGGAGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_473849.p1 GENE.S_Transcript_473849~~S_Transcript_473849.p1 ORF type:complete len:250 (+),score=51.80,EF-hand_1|PF00036.28|9.8e-05,EF-hand_1|PF00036.28|0.0013,EF-hand_1|PF00036.28|0.0002,EF-hand_1|PF00036.28|0.00013,EF-hand_6|PF13405.2|0.00023,EF-hand_6|PF13405.2|0.0086,EF-hand_6|PF13405.2|0.00027,EF-hand_6|PF13405.2|0.0059,EF-hand_7|PF13499.2|6.7e-10,EF-hand_7|PF13499.2|1.7e-06,EF-hand_8|PF13833.2|4.9,EF-hand_8|PF13833.2|4.3e-08,EF-hand_8|PF13833.2|0.31,EF-hand_8|PF13833.2|0.00035,EF-hand_5|PF13202.2|0.082,EF-hand_5|PF13202.2|0.63,EF-hand_5|PF13202.2|0.075,EF-hand_5|PF13202.2|0.015,SPARC_Ca_bdg|PF10591.5|3.2e+03,SPARC_Ca_bdg|PF10591.5|0.0054,SPARC_Ca_bdg|PF10591.5|0.66 S_Transcript_473849:246-995(+)
MKMKMKIKSYLTGCLLCGRKLNDTNTDKYKRLDAKLERKMLELRRIRASAHKNLRTINSIIIKFPRLKQDIRNLRGVFEHYDEDCNGIIDREELEKCFKELQVNDLKEQEIDDLFHSCDVDRSGGIQFNEFIVLLCLIYLLHKQPDSRSSADTTLSSRLGSPQLEPTFDTIVEAFFYMDKNGDGKLNKKDMVMALKDAPWEKSPAHVTNTRFMEMDRDKDGNVSFREFLFALTSWLGIESDDDIPVTGD*

Click here to download the sequence:
Link to NCBI Protein BLAST