Transcript Information: S_Transcript_473921.p1


Annotated TAIR IDAT3G12500.1
Annotated Gene Namebasic chitinase
Annotated Gene Symbol(s)ATHCHIB, PR3, PR-3, CHI-B, B-CHI, HCHIB
Annotation TypeOrtholog
Chromosome Positionchr3:3962501-3963984 | Reverse length=335
E-Value3.1E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6060963676274
Replicate 20.42428441456759
Replicate 30.76844733681669
Condition 2: 8 Hour
Replicate 11.435362809807
Replicate 21.6492067907491
Replicate 31.6396805849986
Condition 3: 24 Hour
Replicate 10.21004695664033
Replicate 20.29056168687625
Replicate 30.56587920139684


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_473921.p1 GENE.S_Transcript_473921~~S_Transcript_473921.p1 ORF type:5prime_partial len:312 (+),score=28.86,Glyco_hydro_19|PF00182.15|5.5e+03,Glyco_hydro_19|PF00182.15|5.5e-131,Chitin_bind_1|PF00187.15|3.5e-15,Chitin_bind_1|PF00187.15|3.4e+03,Chitin_bind_1|PF00187.15|1.6e+04,Chitin_bind_1|PF00187.15|8.9e+03 S_Transcript_473921:1-936(+)
CTAACATACAAAAATATGAAGTTCTATCTAGTAAGTGTTTTGATCATATTGCCTTGCCTTTTAAAAGCAACATCAGCTGAGCAATGTGGGAGGCAAGCTGGTGGCGCACTTTGTCCTAATGGCCTTTGTTGTAGCCAGTACGGATGGTGCGGGACTACCATCGAATATTGTGGGACCGGGTGCCAGAGTGGATGCCCTGGTGGGGGAGATGTGGGGTCCATCATCACTCGTTCCCTCTTTGATCAAATGCTCAAACATCGTAATGAGAATAGTTGTGAGGGTCATGGGTTTTATACCTATGATGCTTTCATTGCAGCGGCTCGTTCTTTCAATGGGTTTGGCACCACTGGGGATCTTACTACTCGTAAGCGAGAGCTTGCCGCTTTCTTTGCTCAAACCTCTCATGAAACCACCGGAGGTTGGCCAAGTGCACCAGATGGTCCTTATGCATGGGGATATTGTTTCCTTAGAGAACAAAACAACCCACCTGCTTATTGTGATTCTCCTAGTTGGCCTTGCCCTGCTGGTCGAAAGTACTATGGCCGAGGACCTATCCAGTTGACCCACAACTACAACTACGGGCTGGCAGGTAAAGCCCTGGGAGTGGACCTGATAAACAACCCAGATTTGGTAGCCACAGACCCAACCATATCCTTCAAGACAGCCATTTGGTTTTGGATGACTGCACAAGGGAATAAGCCCTCTTGCCACAACGTCATCATAGGACAGTGGACCCCATCGGCGGCGGACAGGTCAGCAGGGCGGGTCCCAGGATACGGTGTGATCACCAATATTATAAACGGGGGAATTGAGTGTGGCAAAGGACAAAACGCCCAGGTGGCTGATCGTATTGGGTTCTATAAGAGATACTGTGACCTCTTGGGTGTGAGCTATGGTGACAACTTGGACTGTTACTCCCAGCAACCATTTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_473921.p1 GENE.S_Transcript_473921~~S_Transcript_473921.p1 ORF type:5prime_partial len:312 (+),score=28.86,Glyco_hydro_19|PF00182.15|5.5e+03,Glyco_hydro_19|PF00182.15|5.5e-131,Chitin_bind_1|PF00187.15|3.5e-15,Chitin_bind_1|PF00187.15|3.4e+03,Chitin_bind_1|PF00187.15|1.6e+04,Chitin_bind_1|PF00187.15|8.9e+03 S_Transcript_473921:1-936(+)
LTYKNMKFYLVSVLIILPCLLKATSAEQCGRQAGGALCPNGLCCSQYGWCGTTIEYCGTGCQSGCPGGGDVGSIITRSLFDQMLKHRNENSCEGHGFYTYDAFIAAARSFNGFGTTGDLTTRKRELAAFFAQTSHETTGGWPSAPDGPYAWGYCFLREQNNPPAYCDSPSWPCPAGRKYYGRGPIQLTHNYNYGLAGKALGVDLINNPDLVATDPTISFKTAIWFWMTAQGNKPSCHNVIIGQWTPSAADRSAGRVPGYGVITNIINGGIECGKGQNAQVADRIGFYKRYCDLLGVSYGDNLDCYSQQPFA*

Click here to download the sequence:
Link to NCBI Protein BLAST