Transcript Information: S_Transcript_47393.p1


Annotated TAIR IDAT5G13390.1
Annotated Gene Nameno exine formation 1
Annotated Gene Symbol(s)NEF1
Annotation TypeOrtholog
Chromosome Positionchr5:4292809-4296572 | Forward length=1123
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.661397373866
Replicate 218.166905093629
Replicate 320.793793091425
Condition 2: 8 Hour
Replicate 128.111657113048
Replicate 231.540292747037
Replicate 330.413829774435
Condition 3: 24 Hour
Replicate 118.956985767569
Replicate 218.340780473021
Replicate 316.767062569596


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47393.p1 GENE.S_Transcript_47393~~S_Transcript_47393.p1 ORF type:complete len:1059 (+),score=175.20 S_Transcript_47393:258-3434(+)
ATGGCGATGGCAAAAAGTCCCCTGATCGCTGTGGCCCTTGTACCTTGCGCTGCCTTCCTCGTTGATCTTGGAGGTACTCCTGTTGTTGCCACCTTAATCCTGGGTCTCATGTGCTCTTACATTCTTGATTCTTTAAATTTCAAACCTGGAGCTTTCTTCGGAGTGTGGTTTTCCCTAATTGCTGCTCAGATCGCTTTCTTCTTCAGTTCTTCCCTTGTTTCCGCTTTTAATTCCATCCCTCTTGCTGTCCTTGCTGCTTTCCTTTGTGCTGAGACCAATTTTCTCATTGGTGTATGGTCTTCCCTTCAGTTCAAATGGATTCAGTTGGAAAACCCTTCCATTGTTGTTGCCCTGGAACGTCTTCTCTTTGCCTCCGTTCCTCTTGTGGCCCCTTCCCTCTTCACTTGGGCTGTTGTATCTGCTTTGGGTATGTCCAATGCTTCTTACTATCTAATGGTCTTCAATAGTGTCTTCTATTGGCTTTACTCCCTTCCCCGTACTTCCTCCTTCAAGTCCATGTCCATGTCTAAGCGTGGCGGTCAAGTTGCAGATGATATGCTTATTCTGGGTCCTCTAGAGAGTTGTTTCCATGCTCTCAACCTACTCTTCTTTCCCTTGTTATTCCACATTGCCTCTCACTATTCCCTCCTCTTTTCTTCCGCTTCTTCCGTCTGTGATCTCTTTCTTCTTTTCTTTATTCCCTTCCTCTTTCTTCTCTATGCTTCTACCAGGAATTCCCTCTGGTGGGTCACTAAGGATGCTACCCAGTTGCACAGTATCCGCATTGTCAATGGTGCTCTTGCCTTACTTGTTGTTGTCATCTGCTTGGAAGTCCGAATCGTTTTCCATTCCTTTGGCCGTTATATTCAGGTTCCCCCTCCTTATAGTTACTTCCTAGTCACTGCTACCATGCTTGGAGGTGCCGCTGCTGCTGCTGCTTCTGCTTTGGGTATCATTGCTGATGCTGTTACCTCCCTCGTTTTTGTCATCTTGGCTGTAGTAGCTAGTGCCGCTGGTGCTATTGTTGTGGGATTGCCCATTTGGCTGCTTCCACTACCCTCTTTGTCCGGGTTTTATCTGGCTCGCTTTTTCATAAAGAAGTCTTTGCCATCATATTTTGTATTTGTTGTGCTTGGGAGCCTAATGGTTATGTGGTTTGTGATACATAATTTCTGGGATCTCAACATATGGCTGGCAGGCATGTCTCTTAAATCATTTTGTAAGCTCATTGTTGCAGGCGTTGTTCTGTCCATGGCTACTCCTGGGTTGGCACTTCTCCCAACCAAGTTTAAATTCTTGACCGAAGTTGCATTAATCAGTCATGCACTGTTGCTGTGCCACATTGAGAATCGATTTTTCAATTACAGCAGCATATATTATTATGGTCTGGAGGATGATGTGATGTACCCCAGCTACATGGTTATAGTGACAACCTTTCTGGGGTTGACCCTTGTGAGGAGGCTTACTGTAGACAATAGAATTGGGTCAAGGGCAGTCTGGATTTTGACTTGCCTGTATACTTCTAAGCTAGCTATGCTATTTATTACGTCGAAAGCTGTAGTCTGGGTATCAGCTGTTCTATTATTGGCAGTTTCTCCACCTCTGCTTCTGTACAAGGAGAAGTCGAAAACTTCCTCCAAGATGAAGCCATGGCAAGGATATGTGCATGTCATTGTGGTTTCTGTGGCCGTCTGGTTTTGTCGTGAAGCTATTTTTGAGTCTCTTCAATTGTGGCATGGAAAACCTCCATCTGATGGCCTGCTTTTGGGTTTTTGCATCATTTTGATAGGATTGGCTTGTATTCCCATAGTTGCGTTCCACTTCTCTCATGTTCTGTTTGCCAGGAGGTGTTTGGTACTGGTAGTGGCGACTGGGTTGCTATTTATCTTGCTGCAACCACCCATGCCATTATCATGGACATACCACTCTGATGTCATCAAAGCTGCTCATCAGACTGGAGACGACATCTCAATCTATGGATTCATCACATCAAAGCCTACGTGGCCATCCTGGCTCCTCATTTTGGCTATCTTGCTCACCCTTGCTGCTGTTACCTCATTCATCCCTATCAAGTACATTGTTGAGTTAAGAACATTTTATTCCATTGCTGTTGGTATTGCGGTGGGTATCTACATATCTTTTGAGTACTTCCCTCAGTCTTGGATCTTGCAGGCTCTTATTGTTCTAACTATGATGTGCACTTCTGTTTTTGTCGTCTTCACACATTTTCCCTCTGCCTTAAGTACAAAGGCTTTGCCATGGGTTTTTGCTCTCCTTGTTGCTCTTTTTCCTGTTACCTACTTATTAGAGGGCCAGGTCAGAATAAATAGTCTAATGGAGGATGGAGATGTCACAGATGAGCAACAAAAGTTAACTGCTTTGTTGGCTGTTGAGGGAGCAAGGACATCTCTTCTTGGTCTGTATGCTGCTATTTTCATGCTTATTGGATTGGAAATGAAATTTGAGCTGGCTTCTTTAATGTGGGAAAAGGCTCATGAAAAGGGTAGTCTTAAACAGACACAGTCTGGTCACATCAGTTCTGTGAATTTCCCTGCCAAGATGAGATTTTTACAGCAGCGCAGAGTTTCTTCTGTTCCAACTTTTACAATGAAGAGGATCGCTGCTGAGGGGGCCTGGATGCCTGCAGTTGGAAATGTTGCTACTGTTATGTGCTTTGCCATATGCTTGATCCTGAATGTTAATCTCACTGGTGGCTCAAATCGTGCTATTTTCCTATTGGCTCCAATCTTACTGCTGCTCAACCAGGATTCTGATTTTGTTTCTGGTTTTGGAGATAAACAAAGATACTTCCCTGTTACTGTTGTTATTTCATCTTATCTAGTATTGACTGCTCTACATAGAGTTTGGGAAGAAGTGTGGCATGGAAATGCGGGTTGGGGCTTGGAGATTGGTGGACCAGACTGGTTTTTTGCCGTAAAAAATGTGGCTCTATTGATTCTTACATTTCCAAGCCATATTCTGTTCAATCAGTTTGTCTGGAGCTACACAAAGCAGAAAGACACAGCACCGCTGCTCACTCTACCTCTCAATCTGCCAACCATCATCATTACTGATGTGATCAAGGTCAAAATCTTAGGCCTGTTGGGAGTCATTTATTCCTTGGCCCAGTATCTGATATCAAGACAGCAATACATATCAGGATTGAAATACATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47393.p1 GENE.S_Transcript_47393~~S_Transcript_47393.p1 ORF type:complete len:1059 (+),score=175.20 S_Transcript_47393:258-3434(+)
MAMAKSPLIAVALVPCAAFLVDLGGTPVVATLILGLMCSYILDSLNFKPGAFFGVWFSLIAAQIAFFFSSSLVSAFNSIPLAVLAAFLCAETNFLIGVWSSLQFKWIQLENPSIVVALERLLFASVPLVAPSLFTWAVVSALGMSNASYYLMVFNSVFYWLYSLPRTSSFKSMSMSKRGGQVADDMLILGPLESCFHALNLLFFPLLFHIASHYSLLFSSASSVCDLFLLFFIPFLFLLYASTRNSLWWVTKDATQLHSIRIVNGALALLVVVICLEVRIVFHSFGRYIQVPPPYSYFLVTATMLGGAAAAAASALGIIADAVTSLVFVILAVVASAAGAIVVGLPIWLLPLPSLSGFYLARFFIKKSLPSYFVFVVLGSLMVMWFVIHNFWDLNIWLAGMSLKSFCKLIVAGVVLSMATPGLALLPTKFKFLTEVALISHALLLCHIENRFFNYSSIYYYGLEDDVMYPSYMVIVTTFLGLTLVRRLTVDNRIGSRAVWILTCLYTSKLAMLFITSKAVVWVSAVLLLAVSPPLLLYKEKSKTSSKMKPWQGYVHVIVVSVAVWFCREAIFESLQLWHGKPPSDGLLLGFCIILIGLACIPIVAFHFSHVLFARRCLVLVVATGLLFILLQPPMPLSWTYHSDVIKAAHQTGDDISIYGFITSKPTWPSWLLILAILLTLAAVTSFIPIKYIVELRTFYSIAVGIAVGIYISFEYFPQSWILQALIVLTMMCTSVFVVFTHFPSALSTKALPWVFALLVALFPVTYLLEGQVRINSLMEDGDVTDEQQKLTALLAVEGARTSLLGLYAAIFMLIGLEMKFELASLMWEKAHEKGSLKQTQSGHISSVNFPAKMRFLQQRRVSSVPTFTMKRIAAEGAWMPAVGNVATVMCFAICLILNVNLTGGSNRAIFLLAPILLLLNQDSDFVSGFGDKQRYFPVTVVISSYLVLTALHRVWEEVWHGNAGWGLEIGGPDWFFAVKNVALLILTFPSHILFNQFVWSYTKQKDTAPLLTLPLNLPTIIITDVIKVKILGLLGVIYSLAQYLISRQQYISGLKYI*

Click here to download the sequence:
Link to NCBI Protein BLAST