Transcript Information: S_Transcript_47410.p2


Annotated TAIR IDATCG00120.1
Annotated Gene NameATP synthase subunit alpha
Annotated Gene Symbol(s)ATPA
Annotation TypeOrtholog
Chromosome PositionchrC:9938-11461 | Reverse length=507
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1473.90001805796
Replicate 2171.20377251127
Replicate 3228.46483892539
Condition 2: 8 Hour
Replicate 1225.76367938099
Replicate 2288.10360984467
Replicate 3333.37482130232
Condition 3: 24 Hour
Replicate 1191.05672706439
Replicate 2167.30175868367
Replicate 3287.42207689216


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47410.p2 GENE.S_Transcript_47410~~S_Transcript_47410.p2 ORF type:complete len:508 (+),score=24.13,ATP-synt_ab|PF00006.21|1.6e+03,ATP-synt_ab|PF00006.21|6.4e-76,ATP-synt_ab_C|PF00306.23|2.5e+03,ATP-synt_ab_C|PF00306.23|5.1e-21,ATP-synt_ab_N|PF02874.19|7.5e-16,HAS-barrel|PF09378.6|1.5e-06 S_Transcript_47410:11254-12777(+)
ATGGTAACCATTCGAGCAGACGAAATTAGCAATATTATCCGTGAACGTATTGAACAATATAATCGAGAAATAAAGATTGTAAATACGGGTACCGTACTTCAAGTAGGGGACGGCATTGCTCGTATTCATGGCCTTGATGAAGTAATGGCAGGTGAATTAGTAGAATTTGAAGAAGGAACAATAGGTATTGCTCTGAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGACGGTTTGCTGATACAGGAAGGAAGTTCTGTAAAAGCAACAGGAAGAATTGCACAGATACCCGTGAGTGAGGCTTATTTAGGTCGTGTTGTAAATGCTTTAGCTAAACCCATTGATGGTAGAGGTGAAATTTCAGCTTCTGAATCTCGATTAATTGAATCTCCCGCCCCCGGTATTATTTCGAGACGTTCTGTATATGAGCCTCTTCAAACCGGGCTTATTGCTATTGATTCGATGATCCCTATAGGACGTGGTCAGCGAGAATTAATTATTGGGGACAGACAGACTGGTAAAACGGCAGTAGCTACAGATACGATTCTTAATCAACAAGGACAAAATGTAATATGCGTTTATGTAGCTATTGGCCAAAAAGCGTCTTCCGTGGCGCAGGTAGTTACTACCTTTCAGGAAAGGGGAGCAATGGAATACACTATTGTGGTAGCTGAAACGGCAGATTCCCCTGCTACATTACAGTACCTTGCCCCTTATACCGGAGCGGCGCTGGCTGAATATTTTATGTACCGTGAACGACACACTTTAATCATTTATGATGATCTTTCCAAACAAGCACAAGCTTATCGACAAATGTCTCTTCTATTACGAAGACCGCCAGGCCGTGAAGCTTATCCGGGAGATGTTTTTTATTTGCATTCACGACTTTTGGAAAGAGCCGCTAAATTAAGTTCTCGTTTAGGTGAAGGAAGTATGACTGCTTTACCAATAGTAGAGACCCAATCAGGAGATGTTTCGGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGACAAATATTCTTATCCGCCGATCTATTCAATGCTGGAATCAGGCCAGCTATTAATGTGGGTATTTCTGTTTCCAGGGTAGGATCCGCGGCTCAAATTAAAGCCATGAAACAAGTAGCTGGGAAATTAAAATTGGAATTGGCCCAATTCGCAGAATTAGAAGCCTTTGCGCAGTTTGCTTCTGATCTTGATAAGGCTACTCAGAATCAATTGGCAAGAGGTCAACGATTACGTGAATTGCTAAAACAACCCCAATCTGCCCCTCTTACGGTAGAGGAACAGATAATGACTATTTATACCGGAACGAATGGTTATCTCGATTCATTAGAAATTGGGCAGGTAAGGAAATTTCTTGTTGAATTACGTACTTACCTAAAAACGAATAAACCGCAGTTTCAAGAAATTATATCTTCTACCAAGACATTTACGGAAGAAGCGGAAGCCCTTTTAAAAGAAGCTATTCAAGAACAGATGGAACGCTTTCTACTTCAAGAACAAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47410.p2 GENE.S_Transcript_47410~~S_Transcript_47410.p2 ORF type:complete len:508 (+),score=24.13,ATP-synt_ab|PF00006.21|1.6e+03,ATP-synt_ab|PF00006.21|6.4e-76,ATP-synt_ab_C|PF00306.23|2.5e+03,ATP-synt_ab_C|PF00306.23|5.1e-21,ATP-synt_ab_N|PF02874.19|7.5e-16,HAS-barrel|PF09378.6|1.5e-06 S_Transcript_47410:11254-12777(+)
MVTIRADEISNIIRERIEQYNREIKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTIGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFMYRERHTLIIYDDLSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQPQSAPLTVEEQIMTIYTGTNGYLDSLEIGQVRKFLVELRTYLKTNKPQFQEIISSTKTFTEEAEALLKEAIQEQMERFLLQEQA*

Click here to download the sequence:
Link to NCBI Protein BLAST