Transcript Information: S_Transcript_474528.p1


Annotated TAIR IDAT1G23460.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:8327382-8329622 | Forward length=460
E-Value3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.95533850587827
Replicate 21.0182825949622
Replicate 30.094578133762054
Condition 2: 8 Hour
Replicate 11.093609759853
Replicate 20.9178194313734
Replicate 31.3117444679988
Condition 3: 24 Hour
Replicate 10.56012521770754
Replicate 20.464898699002
Replicate 30.3880314523864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_474528.p1 GENE.S_Transcript_474528~~S_Transcript_474528.p1 ORF type:internal len:195 (-),score=38.20,Pectate_lyase_3|PF12708.3|2.4e-07,Glyco_hydro_28|PF00295.13|1.4e-06 S_Transcript_474528:3-584(-)
GAGAATCTAGAGCTATTAAAACGAAACAATTTATTGGAAAGAGAGCATGAAACAGAGGAGACAAATAAATCATTTATTTTCATAAGAATTCTGATGGAACTTGGAAGCTTGCTGATTACTGCTCATGGTATGGCTGAAAACAAGCTACACAAGACAGTTGCCCTGCTTGGAGAACTTGAAAGTTTCGACATTTACGAAGAAGATGAAATAGAAGATTATGAAATGCCATCATGGACTAGCGGACATGGTAAGAAAGTTCTTGTGAATGTTGATAGCTTTGGGGCCATTGGAGATGGAGTTTCTGATGATACTCAGGCCTTCTTAAAAGCATGGAACCAATCCTGCACTACGCCAAATTCAGTCTTCTTGGTTCCTGGAGAGCATCGTTATCTGGTTAATGCAACAAAGTTTCAGGGACCATGTGCTGATAGATTAATAGTTCAAATTGATGGGACGATAGTGGCACCGGAAGAGCCTAAGAACTGGGATCCAAACTTTTTGCGGGCATGGTTGAGCTTTTACAACTTAACTGGTGTACTTTTCCAAGGCAGTGGGGTTATCGATGGTTCAGGCAGCAAATGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_474528.p1 GENE.S_Transcript_474528~~S_Transcript_474528.p1 ORF type:internal len:195 (-),score=38.20,Pectate_lyase_3|PF12708.3|2.4e-07,Glyco_hydro_28|PF00295.13|1.4e-06 S_Transcript_474528:3-584(-)
ENLELLKRNNLLEREHETEETNKSFIFIRILMELGSLLITAHGMAENKLHKTVALLGELESFDIYEEDEIEDYEMPSWTSGHGKKVLVNVDSFGAIGDGVSDDTQAFLKAWNQSCTTPNSVFLVPGEHRYLVNATKFQGPCADRLIVQIDGTIVAPEEPKNWDPNFLRAWLSFYNLTGVLFQGSGVIDGSGSKW

Click here to download the sequence:
Link to NCBI Protein BLAST