Transcript Information: S_Transcript_47467.p1


Annotated TAIR IDAT3G57930.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42190.1); Has 1519 Blast hits to 1241 proteins in 182 species: Archae - 0; Bacteria - 60; Metazoa - 576; Fungi - 133; Plants - 127; Viruses - 30; Other Eukaryotes - 593 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:21447250-21447675 | Reverse length=141
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.179303660651
Replicate 220.664443740489
Replicate 315.975046044246
Condition 2: 8 Hour
Replicate 131.237191450448
Replicate 228.673777834016
Replicate 328.971539350432
Condition 3: 24 Hour
Replicate 113.383837068181
Replicate 214.04517900506
Replicate 314.920082605843


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47467.p1 GENE.S_Transcript_47467~~S_Transcript_47467.p1 ORF type:complete len:142 (+),score=53.80 S_Transcript_47467:554-979(+)
ATGATGGGTAGAGGTAGAGGAAAAGGGAAGAAGCAAACTGCTGTTGCTACTCGGGATGATTTAGGGAGCACTGAAGAAGAAAAGATTCTGGCATCAAAGAGGAGAGGAAGACCACAGAAACCATTGAAGGATGATGTTGAAGAAGATGGAGTGAATGATAAGCTAGAAAATGATGGTGATGAGTTTAAGAGTTCAATCGCGAGCAAAGATGGTGTAGATCAAATCCTTGCAGATAATGGGACAAAGAGGAGAAAGAGATCTTCTCAAGTTAAAGAGAATTCAGATCACATAAAGGAAGAGAATGGCTCTGAAGTCAAACATAGCACTGAGGATTCTGTTAAACCACCTGTAGGGTTTCGACAAAATGGAAGTAGGCGAAAAAACAAGCCTCGTCGAGCTGCTGAAGTTGGTGTGGAATGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47467.p1 GENE.S_Transcript_47467~~S_Transcript_47467.p1 ORF type:complete len:142 (+),score=53.80 S_Transcript_47467:554-979(+)
MMGRGRGKGKKQTAVATRDDLGSTEEEKILASKRRGRPQKPLKDDVEEDGVNDKLENDGDEFKSSIASKDGVDQILADNGTKRRKRSSQVKENSDHIKEENGSEVKHSTEDSVKPPVGFRQNGSRRKNKPRRAAEVGVECK*

Click here to download the sequence:
Link to NCBI Protein BLAST