Transcript Information: S_Transcript_47475.p1


Annotated TAIR IDAT3G17900.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 44 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 39; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6128983-6133069 | Forward length=838
E-Value5E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7456060861224
Replicate 212.144892373796
Replicate 311.386008427199
Condition 2: 8 Hour
Replicate 113.691301060413
Replicate 215.571016717556
Replicate 314.585844077117
Condition 3: 24 Hour
Replicate 113.691511483541
Replicate 211.544711530675
Replicate 312.374195494529


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47475.p1 GENE.S_Transcript_47475~~S_Transcript_47475.p1 ORF type:complete len:852 (+),score=171.40 S_Transcript_47475:363-2918(+)
ATGAATTTCCTGCTGCGGCCAAGCCAAACTGCCGCAGCAGCAGATCAGGCAGCAGGTACGCCGCCATTGAGTAAAGCTCCTACCGCAAAAGCCGTTACGACATTGGAAGGTTTAATCGCCGAAGATAAGTCGCCTTTAGTTAATTATAATTATTATTCCAATTCCAGTGAAGATCATAACAACCGTGATGATTCCTTTGGTACTGGTAGTAATAGTAATATTGTGAATGGGAATATGAGTTCGAGTAGTACCGGTAGTGGTGGTTTCAATTTCACTCCTCTTGCTGATAAACACATTGATGTTATGGATGATGAAGGCTGGATCGCCATTCCTTTCAAGGAACTTCCTGATGATTGGAGTAGTGCTCCAGATATGCATTGGTTCCGCTCTTTCGACCGTTCTTTTGTTTTTCCAGGTGAGCAGGTTCATATTGTAGCTTGTTTGTCGGCATCCAAACAAGACACTGAAACCATAACTCCATTTAAAGTTGCTGCTGTAATGAATAAAAATGGTGCCGGACATGGTGTCAAGAACCAGAATGGAAATAGTGCACATCAAGAATCACTTTCTGAAGCACAGCAAGTAGAGCCTGGTGGTAATGGAGATGCAAATAGTGGAAGTGATCATCCTGCAGATGTGTCTGCTAGTGAATCTTTTCTTAGAATGCAGGAACATAGAAGACAAACTCAAACACTGTTACAGAGATTTAAGAACTCTCATTTTTTTGTCCGAATAGCTGAGGCGCGGGAGCATCTATGGTCAAAAAGAAATGCTGCAGAAGGCTCAGAGCTGGCAAAGGACATGGAGAATACAAAGGACGATAAGATGGCTGGATTAGGAAACTCCATAAATGCAGTCATTGATAGTGGAAAATTTGATGCCCGGGTTTCTGGCGGTGTGGCGAGAAATTCTGTTAAGTGCTATTCTCTCGCTAATGGGGACATAGTGGTTCTTTTACAAGTGAATGTTGGTGTTGATCCTTTGAATGATCCCATACTGGAGATTCTTCAATTTGAGAAACATCATGGCGGGACTACCACTTTTGAAAGTGATATATCAGCTAGTATGGAGCATAGACCATGTGGAGACCTGTTGAAATGGCTGCTTCCTTTAGAAAACTCTCATCATCCAGTAAATAGACCTTTATCGCCTCCTTTAATTAACGCATCCCATAAATCGAGCTTTTCTGCATCAAGCGGTTCCCAGCTCTTTTCTTTTGGCCATTTCAGAAGTTACTCCATGTCTTCACTTCCACAAAATGTTGCTCCTACAACATCACCACCTATCCCTGCTGCTGCTGCTTCTTCAAAGCCTAGTGTTGATGTTGAAGATTGGGACCAATTTGCATCTCAAAAGTTTGCGAAGAATCTGAAAACTGGGAGCCAGAATTTGTTGTCCTTTCGTGGCGTTCCTTTGGAGCCCGAGAGATTTTCTGTGTGTTGTGGATTGGAAGGCATTTATATACCAGGACGAAGGTGGAGGAAGCGGCTTGAGATCATTCAACCCGTTGAAATTCATACTTTTGCTGCAAATTGCAATACAGATGACCTCCTTTGTGTCCAGATCAAGAATATTTCTCCAGTGCATATTCCAGATATTGTTGTATATATAGATGCTATAACCATTATTTTGGAAGAGGCGTCAAAAGTGGGTCTAGCTTCATCTGTTCCTATTGCATGTATTGAAGCTGGAACAGATCATAGGCTGCCAGATTTGGCACTAAGGCGAGGGGAAGAACATTCTTTTATTCTCAGGCCTGCTATTTCAGTCTTGAAGAAGTCTACAACTCATGGTGATAGATTTACTCAGTCATCGCGTCCTAAAGCTGGGATAAGGACAGCAAGCATGCGGCTGCCTCCAAAGGCTGTTGAGGGAAAAAGAAATTTATCTTTATCTGACAAGTATGCAGTTTTAGTGTCCTGTCGTTGTAACTATTCTGAATCAAGACTGTTTTTCAAGAAGCCCACAGATTGGCGACCCCGCATCTCAAGGGACTTCATGATATCAGTTGCATCTGAGATATCAAAACAAACACTAGACCTTACTGGAAGAGTCTCTCAGCTTCCAGTTCAGGTGTTGACTCTTCAGGCATCAAACCTTACATCTGACGATCTTAATTTAACAATTCTTGCGCCAGCATCTCTTACGTCGCCTCCTTCTGTGCTGTCACTAAATTCAACACCTTCATCACCAATGAGCCCGTTTGCTGGATTTGCTACAACACAAAGACTAAGCACAGCACCTCGTGTTGTCGAAAATCAAAAACAAATTGCTGCTCATTCGACTCCTTTAGTTGAGCAGGCTGTTCCTGTTGCTGATGTGATTCCAACAACTGCTTTGAGCTGTACTCATTTATGGCTGCAGAGTAGGGTTCCACTAGGATGTGTTCCTTCTCAATCCACTGCCACTATCAAGCTTGAACTGCTGCCACTGACAGACGGCATAATTACGCTTGACACTTTGCAGATATATGTTAAGGAGAAAGGGGTAACATATATCCCAGAACATCCGCTGAAGATAAACGCAACATCAAGCATAGCTACTGGAATCCTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47475.p1 GENE.S_Transcript_47475~~S_Transcript_47475.p1 ORF type:complete len:852 (+),score=171.40 S_Transcript_47475:363-2918(+)
MNFLLRPSQTAAAADQAAGTPPLSKAPTAKAVTTLEGLIAEDKSPLVNYNYYSNSSEDHNNRDDSFGTGSNSNIVNGNMSSSSTGSGGFNFTPLADKHIDVMDDEGWIAIPFKELPDDWSSAPDMHWFRSFDRSFVFPGEQVHIVACLSASKQDTETITPFKVAAVMNKNGAGHGVKNQNGNSAHQESLSEAQQVEPGGNGDANSGSDHPADVSASESFLRMQEHRRQTQTLLQRFKNSHFFVRIAEAREHLWSKRNAAEGSELAKDMENTKDDKMAGLGNSINAVIDSGKFDARVSGGVARNSVKCYSLANGDIVVLLQVNVGVDPLNDPILEILQFEKHHGGTTTFESDISASMEHRPCGDLLKWLLPLENSHHPVNRPLSPPLINASHKSSFSASSGSQLFSFGHFRSYSMSSLPQNVAPTTSPPIPAAAASSKPSVDVEDWDQFASQKFAKNLKTGSQNLLSFRGVPLEPERFSVCCGLEGIYIPGRRWRKRLEIIQPVEIHTFAANCNTDDLLCVQIKNISPVHIPDIVVYIDAITIILEEASKVGLASSVPIACIEAGTDHRLPDLALRRGEEHSFILRPAISVLKKSTTHGDRFTQSSRPKAGIRTASMRLPPKAVEGKRNLSLSDKYAVLVSCRCNYSESRLFFKKPTDWRPRISRDFMISVASEISKQTLDLTGRVSQLPVQVLTLQASNLTSDDLNLTILAPASLTSPPSVLSLNSTPSSPMSPFAGFATTQRLSTAPRVVENQKQIAAHSTPLVEQAVPVADVIPTTALSCTHLWLQSRVPLGCVPSQSTATIKLELLPLTDGIITLDTLQIYVKEKGVTYIPEHPLKINATSSIATGIL*

Click here to download the sequence:
Link to NCBI Protein BLAST