Transcript Information: S_Transcript_47488.p1


Annotated TAIR IDAT5G17370.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5721801-5724719 | Reverse length=529
E-Value4.4E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5443752573293
Replicate 24.1014160074867
Replicate 35.3791313577168
Condition 2: 8 Hour
Replicate 14.1693872094395
Replicate 26.0231900183879
Replicate 34.7824017062458
Condition 3: 24 Hour
Replicate 15.6712678292889
Replicate 25.2301103637725
Replicate 34.6887133830023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47488.p1 GENE.S_Transcript_47488~~S_Transcript_47488.p1 ORF type:3prime_partial len:312 (+),score=45.18 S_Transcript_47488:169-1101(+)
ATGCCACAAGAATTACCAGGGTTCTATTATGACCCAGAAAAGAACAGATACTTCCCTATTAAGGGTCCCATTCCTGGCTCTTCTCGTAAACCTCCTGCTACGCCTAAACCTACACAGGTACCTAACCCACACCGGAGGGATAACCGGATTTCTAAGCTACTTCACTACAGGGAGCTGTATGGTAATTTAATCAATTCCAGCAATCAAAAAGGTAGCTTTGAAAAGCAATGCAAGGAGAAACTAGTCTCTCAACCCAAGGTTTGGAAATATCAGGGTTTAGATAGGGATGGAGATGGGGCACTAAGCATTGTGCGGATTGAATTTGAGACACCTGTGGGCCAATGCACATCAGATGCTTTGCTAACAGGCAGTGTAAACTGCTGGTTAAGTCTTTTCGACATCGGAAATATTGGACGATATGTGAATCATGGTATAAAGAACAGTGCAGATTGTGTGTGGCCTGAAAGTAGTGAAGTGGACTGCTCTGAGATAATCAAAGATATCTGGAGGCTAAATGGAGCTACAATAATTTTACCATCAAGCATCTCTTGTATAAGTGTACCCAGAAAGGAATACATTCATGCAGATGATGATGGTTCAGTCGTGCAATGCGCATTGGTTACGACTTTGGGGTCAGAAGTATCTGGTGGTTCACTTGCTGTTCTAAATCTTGCTGACCCTGTGGATTTGACTTCAAATATTCCTGCTGTTGAAAGATTGCGTGAGCTTGCCTCACTCAATTGTACGATTTGGGCTGCAGATTCCCTTTGCAATGGTAATAGGGCAGTTTTAGGCACTGACCTTGGAGCTACATTGGTAGATTTGGAAACTGGAGTGCGATCGAATTTATGCCGTAGTAAGAGTGACGTGTTATCAGTGCAACTTATTGAGTCGGGAAAGACTGTTCTATGTGGACTGAGAAATGGAGCAGTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47488.p1 GENE.S_Transcript_47488~~S_Transcript_47488.p1 ORF type:3prime_partial len:312 (+),score=45.18 S_Transcript_47488:169-1101(+)
MPQELPGFYYDPEKNRYFPIKGPIPGSSRKPPATPKPTQVPNPHRRDNRISKLLHYRELYGNLINSSNQKGSFEKQCKEKLVSQPKVWKYQGLDRDGDGALSIVRIEFETPVGQCTSDALLTGSVNCWLSLFDIGNIGRYVNHGIKNSADCVWPESSEVDCSEIIKDIWRLNGATIILPSSISCISVPRKEYIHADDDGSVVQCALVTTLGSEVSGGSLAVLNLADPVDLTSNIPAVERLRELASLNCTIWAADSLCNGNRAVLGTDLGATLVDLETGVRSNLCRSKSDVLSVQLIESGKTVLCGLRNGAV

Click here to download the sequence:
Link to NCBI Protein BLAST