Transcript Information: S_Transcript_475244.p2


Annotated TAIR IDAT1G57860.1
Annotated Gene NameTranslation protein SH3-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:21430034-21430827 | Reverse length=164
E-Value1E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6529814431789
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_475244.p2 GENE.S_Transcript_475244~~S_Transcript_475244.p2 ORF type:complete len:161 (+),score=3.52,Ribosomal_L21e|PF01157.14|2e-47,Ribosomal_L21e|PF01157.14|2.1e+03 S_Transcript_475244:41-523(+)
ATGGGTCACCCAGCGGGTCTTCGCGCGGGAACGCGCTATGCGTTCAGCAGAAACTTCCGTGAGAAGGGTATGATCAAGCTCTCCACGTACCTCCGCGAGTACCGTGTCGGCGACATTGTCGACATTAAGGCCAACGGTGCCGTCCAGAAGGGTATGCCTCACAAGGTCTACCACGGCAAGACTGGTGTCATCTACAACGTCACCAAGTCCGCCGTCGGTGTCATCATCTACAAGAAGGTCAAGCACCGCTACATCGAGAAGCGCATCAACCTCCGCATCGAGCACATCTCTCCCTCCCGCTCGAGAGACGACTTCCTCCGCCGTGTCAAGGAGAACGCCGCCCTGAAGAAGAAGGCCCAGGCCGAGGGCAAGTCCGTCCAGCTCAAGCGCCTCCCCGCCCTCCCCCGTGAGGCCCGCACCGTCGACTTCAAGGAGAACAAGCCCGAGACCGTCACCCCTCTTCCTTACGAGACCACGATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_475244.p2 GENE.S_Transcript_475244~~S_Transcript_475244.p2 ORF type:complete len:161 (+),score=3.52,Ribosomal_L21e|PF01157.14|2e-47,Ribosomal_L21e|PF01157.14|2.1e+03 S_Transcript_475244:41-523(+)
MGHPAGLRAGTRYAFSRNFREKGMIKLSTYLREYRVGDIVDIKANGAVQKGMPHKVYHGKTGVIYNVTKSAVGVIIYKKVKHRYIEKRINLRIEHISPSRSRDDFLRRVKENAALKKKAQAEGKSVQLKRLPALPREARTVDFKENKPETVTPLPYETTI*

Click here to download the sequence:
Link to NCBI Protein BLAST