Transcript Information: S_Transcript_47531.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value1.1E-252
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.831421926648
Replicate 216.342807079641
Replicate 317.723721031608
Condition 2: 8 Hour
Replicate 121.283820355501
Replicate 221.281602604652
Replicate 322.603939760448
Condition 3: 24 Hour
Replicate 116.692386604898
Replicate 216.920545484875
Replicate 317.994674955697


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47531.p1 GENE.S_Transcript_47531~~S_Transcript_47531.p1 ORF type:complete len:513 (+),score=114.92,NMD3|PF04981.9|6.8e-72 S_Transcript_47531:173-1711(+)
ATGGAGCAGGATTCTGGTATGTTTTTTGTGCATCAGACTGTGGGCACAGTTCTTTGCTGCAAATGTGGGATTCTTATGCAACCAAATGCGGCCAATATGTGTGTGAAGTGTTTGCGTTCAGAAGTCGACATCACCGAAGGCTTGCTTAAACATGTCACAATCTTGTTTTGCCCTGATTGTGAGACTTACTTGCAGCCTCCGAAGACGCGTATTAAAGCCCAGCTAGAATCGAAAGAACTCCTAACATTCTGCTTGAAGAAGCTGAATTTGGATAAAGCTAAGGTCACATTGGTGCATGCTGAGTTTGTGTGGACTGAGGAACACTCAAAGAGGATTAAAGTTAAAGTGACAATTCAGAAAGAAGTCCTTCACGGGGCTGTGTTACAGCAAGCTTATCAGGTTGAGTATGTTGTGCACCATCAGATGTGTGATGGGTGTATGAGGCTCCAGGCGAATCCCGATCAGTGGGTGGCAGCTGTTCAACTTAGGCAGCATGTCACTCACAGAAGGACTTTCTTCTATCTGGAGCAACTCATTCTTAAACATGATGCTGCAGGCCAAGCAGTCAGGATTAAGGGGCTAGAACAGGGCATTGATTTCTTCTTCTCCAACAGAAGTCATGCTGTCAAGTTTGTCGAGTTTGTGGGCAAAGTTGCACCTGTCAGGAGTCGCAATGACAAAGAGCTCGTGTCTCATGATTCAAAGAACAACACTTACAATTACAAGTATACCTTCTCTGTTGAGATTTGCCCCATCTGTCGTGAGGACCTAATCTGTCTCCCTCCAAAAGTCTCTATGAATTTGGGGAATTTGGGTCCCATTGTGATTTGCACAAAAGTAAGCAACAGCATAATGTTGATGGATCCGAACACTTTGAGGTATTGTTTCTTGGATGCTGATCAGTACTGGAGATCACCTTTCCACTGTCTGCTTTCTAGCAGACGACTTGTGGAATACATTGTGCTGGATGTCGATAATGTTTCTGCTGAGGTTAATGTTGCTGGCTCAAGATATGCTTTGGCTGATGTCCAAGTGGCTCGTGTATCAGATTTTGGAAAGAACGATACAATTTTCTTTGTTAGGACACACTTGGGTCATCTTTTAAGTCCAGGGGATTATGCCCTTGGCTATGATCTCTATGGGGCTAACCTCAATGACTCTGAGTTGGACAAATACAGAGGTCTTGTCCTTCCCGAAGCAATCTTGATTAAGAAGAGCTATGAAGAGAAGCGTCAAAGAAAACGTGGGAAGCATCGGGCTTGGAAACTCAGGAACCTTGAAATGGAGGTGGAGAATGCAGCTAGAGGTAGAGTTGACCAGGATAAGATGGATAATGAGTATGAGCATTTTTTGAGAGACTTGGAAGAAAATCCTGAGTTGAGGTTTAATATATCATTGTATCGCAACAAGGAGTATCAGCCATCAGAAACTGCATCTATGACCGATGGTGATGAGCTGCCTTCTGTACCTTTGGATGAGCTGCTTGCTGATCTTGATTTAAGTGATGATGAAGCTGGCGGTAGTAACATGAGGGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47531.p1 GENE.S_Transcript_47531~~S_Transcript_47531.p1 ORF type:complete len:513 (+),score=114.92,NMD3|PF04981.9|6.8e-72 S_Transcript_47531:173-1711(+)
MEQDSGMFFVHQTVGTVLCCKCGILMQPNAANMCVKCLRSEVDITEGLLKHVTILFCPDCETYLQPPKTRIKAQLESKELLTFCLKKLNLDKAKVTLVHAEFVWTEEHSKRIKVKVTIQKEVLHGAVLQQAYQVEYVVHHQMCDGCMRLQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAGQAVRIKGLEQGIDFFFSNRSHAVKFVEFVGKVAPVRSRNDKELVSHDSKNNTYNYKYTFSVEICPICREDLICLPPKVSMNLGNLGPIVICTKVSNSIMLMDPNTLRYCFLDADQYWRSPFHCLLSSRRLVEYIVLDVDNVSAEVNVAGSRYALADVQVARVSDFGKNDTIFFVRTHLGHLLSPGDYALGYDLYGANLNDSELDKYRGLVLPEAILIKKSYEEKRQRKRGKHRAWKLRNLEMEVENAARGRVDQDKMDNEYEHFLRDLEENPELRFNISLYRNKEYQPSETASMTDGDELPSVPLDELLADLDLSDDEAGGSNMRE*

Click here to download the sequence:
Link to NCBI Protein BLAST