Transcript Information: S_Transcript_475962.p1


Annotated TAIR IDAT1G78640.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT2G33720.1); Has 92 Blast hits to 55 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29579715-29581988 | Reverse length=487
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.25963903644079
Replicate 20.32287009108558
Replicate 30.089964566261466
Condition 2: 8 Hour
Replicate 10
Replicate 20.10913096897428
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.11055517842121
Replicate 30.12303436295179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_475962.p1 GENE.S_Transcript_475962~~S_Transcript_475962.p1 ORF type:5prime_partial len:205 (+),score=36.43 S_Transcript_475962:2-616(+)
TCTAGTTCCTTTTCTAGTTTCAGTATTATCTCTCTGCGCCTCCTTTCTAATTCTTCTAAGTTTGATCATACTGCGTTAATGCAGACTGTTAAATTCGTTCTCTTTTTTGGCGCTGTGATTCCTTTTCCCTTGAAGAAAAAGCCAAAGACTGATTATATTTTTATCAACAACTGTCATGATGTTGAAGAAGACCCACCACCAAAAGGGATTTCTGAGAATCATGATGGGGAATTTTTTCTCTTTGGGGTCAGAAATCAACTAGGAGATCATCAAGAAAAGGCCACCCAAGAAAATAATGAAGAACATCCAGCAGTACTAACCCCTACAGTACCTGTTGCAGTGGCATTCCCACCAGCATTTGATTGTGACGGAGGTGAATGTCGGCTGCTGATCCCCAAGGAGTCAGTTGCTGTTCACAAACTCGAGTATCTCGACCTTCAAGAAAAGGCCAGATTTGAAAGCACTGAAGGACTGGCAGTAAGAGTTATGGTTCTTAAAGGTAGTTGGGTTCCTGGCTTCGTTAACTGCAGGAAGCTTGTGGAAGGAATGCTAATTGGTTTGGCTTGGGATCAACGCACCCATATGCTTCTCTTCTCGGTCCTGGGGACGCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_475962.p1 GENE.S_Transcript_475962~~S_Transcript_475962.p1 ORF type:5prime_partial len:205 (+),score=36.43 S_Transcript_475962:2-616(+)
SSSFSSFSIISLRLLSNSSKFDHTALMQTVKFVLFFGAVIPFPLKKKPKTDYIFINNCHDVEEDPPPKGISENHDGEFFLFGVRNQLGDHQEKATQENNEEHPAVLTPTVPVAVAFPPAFDCDGGECRLLIPKESVAVHKLEYLDLQEKARFESTEGLAVRVMVLKGSWVPGFVNCRKLVEGMLIGLAWDQRTHMLLFSVLGTP*

Click here to download the sequence:
Link to NCBI Protein BLAST