Transcript Information: S_Transcript_476123.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.58859796011491
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.22676433622321
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_476123.p1 GENE.S_Transcript_476123~~S_Transcript_476123.p1 ORF type:internal len:94 (+),score=1.91,LRR_8|PF13855.2|2.4e-07,LRR_8|PF13855.2|0.018,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|0.00056,LRR_4|PF12799.3|8.8e-05,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|0.031 S_Transcript_476123:2-280(+)
CTCTTGGAAGTCACTCCTGGGCTTACCGGCCCAATCCCTCCGGCTATCGCCAAATTGACCAAACTCCAACACCTTCTTTTGAACATAAATAACCTCACGGGCCCAATCCCTGAATTCCTGGCCCAACTTACGGATCTTGAGGAAATTGATCTCAGCTCAAATAGCTTCACCGGTCCACTCCCCTTAAGATTGGACCGGCTTACCAAGCTTAAAACTCTTAATCTCGGTTCAAACAAATTATCCGGTCCAATTCCCGACTCCTTGAGCCGGATTAAGAGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_476123.p1 GENE.S_Transcript_476123~~S_Transcript_476123.p1 ORF type:internal len:94 (+),score=1.91,LRR_8|PF13855.2|2.4e-07,LRR_8|PF13855.2|0.018,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|0.00056,LRR_4|PF12799.3|8.8e-05,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|0.031 S_Transcript_476123:2-280(+)
LLEVTPGLTGPIPPAIAKLTKLQHLLLNINNLTGPIPEFLAQLTDLEEIDLSSNSFTGPLPLRLDRLTKLKTLNLGSNKLSGPIPDSLSRIKS

Click here to download the sequence:
Link to NCBI Protein BLAST