Transcript Information: S_Transcript_476222.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20710506797806
Replicate 20.25754229055465
Replicate 30
Condition 2: 8 Hour
Replicate 10.082978172440206
Replicate 20.17409998941422
Replicate 30.082941041264519
Condition 3: 24 Hour
Replicate 10.76499591990408
Replicate 20.35274414904821
Replicate 30.49070125301782


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_476222.p1 GENE.S_Transcript_476222~~S_Transcript_476222.p1 ORF type:3prime_partial len:257 (+),score=36.51 S_Transcript_476222:130-897(+)
ATGAATAAAAGTTCTTTATTGTGTCGGGGAGTAGATGATGCAGAGAAAGACATTATGCTTCAGAGTCTACAACTTCAGGAGGGACACTTGCCTGTAAGATATTTGGGGATGCCTTTATCACACAAGAAGATGACTATTATTCAATGCTGGGAGCTTCTTGAGAAAATGATTACTGGAATCAACTCTTGGACAACGAAATTTCTCTCTTATGCTGGTAGATGTCAGTTGATTCAAGCGGTTTTATTTGGTATGCAATCTTATTGGGCTCAGGTTGCTCTCCTTCCCAAAAAGATAGTGCAAGCGGTGGAAGCCTTATGTAGACGTGTCCTCTGGACTGGAAAGGCTGATAACAGTATGAAGGCTTGGGTGGCTTGGGATCAAGTCATAAAACCAAAGAAAAATGGTGGTCTAGGATTCATTAATTTGCATATGTGGAATAAAGCTGTTGTTAGTAAACTGTGCTGGGACTTTATGAGGAAGAAGGACAAGATGTGGATAAAATGGCTCCATGAATACTACCTTGGGCTGGAGACGGACAGGGCTATTCTTATGCACCTGTCTTGGATGGTGAGAAAGATCATTGAGCAAAGGGAGAGGGTTTATATCAATGCAGGGGTGTTTGCACAGGAGAAAACAAAGATCAATACTTTTTATAAACATTTGAGGGGTAATGAAGCTAAAGTGGGATGGTACACTTTGGTATGGACTAGCTTTGCTAGGCCTCGAGCCAAATTTATCACTTGGATGTGTATGAAGCAAAGACTATTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_476222.p1 GENE.S_Transcript_476222~~S_Transcript_476222.p1 ORF type:3prime_partial len:257 (+),score=36.51 S_Transcript_476222:130-897(+)
MNKSSLLCRGVDDAEKDIMLQSLQLQEGHLPVRYLGMPLSHKKMTIIQCWELLEKMITGINSWTTKFLSYAGRCQLIQAVLFGMQSYWAQVALLPKKIVQAVEALCRRVLWTGKADNSMKAWVAWDQVIKPKKNGGLGFINLHMWNKAVVSKLCWDFMRKKDKMWIKWLHEYYLGLETDRAILMHLSWMVRKIIEQRERVYINAGVFAQEKTKINTFYKHLRGNEAKVGWYTLVWTSFARPRAKFITWMCMKQRLL

Click here to download the sequence:
Link to NCBI Protein BLAST