Transcript Information: S_Transcript_47624.p1


Annotated TAIR IDAT1G20370.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7051846-7053588 | Reverse length=549
E-Value4.8E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6312289356817
Replicate 21.869727928603
Replicate 32.5007099774374
Condition 2: 8 Hour
Replicate 13.4337492883519
Replicate 23.5390495023296
Replicate 33.3719984911835
Condition 3: 24 Hour
Replicate 12.7151832587179
Replicate 23.009037130193
Replicate 32.0662126772553


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47624.p1 GENE.S_Transcript_47624~~S_Transcript_47624.p1 ORF type:complete len:354 (+),score=82.46,PseudoU_synth_1|PF01416.16|2.6e-11 S_Transcript_47624:806-1867(+)
ATGGGTAATAAGAGGGATTGGCATGAAAAAGGTGTTTTTAAAGGTTTTGTTCAGTCCGGCATTTCGTCGAACAGTGAGAGCGCATCTTTGAATATTATTGAGAAAGAGAGGGATCAAATGCACTGTGATGTTTCTTTGGATGGTAATGGTAATGGGGTGGTAAATAATGTGGTTGTTGAAGATTCTGAGGTTTTAGCTCAGTGTGGCATTTCGTCGAACAGTGAAGCTGCATTGTTATGTACTGAAGATGGTGAGAAGCAGAAAGAAGAGTGTGATGTTAATGTAGGGAATAATGGTGCTGCTGCTAATTTAGATGCTAATGCTGTTAATTCTGAATCGATGGTCGTGGACGAGGTATGTGAAGGAGATTCAAATGGGTGTGGCAATGGAGAGAAGGAGAAGGGGAAGGAAAGTAGTGATTTCAAGTATGGGAATGAAGAAAAAGAGAGGTTCAATAGAATACTAAAGTATTACGAGGGGACACATAACTTTCATAACTTTACCACTAGAACAAAGGCGGAAGATCCGTCTGCAAAACGATACATTGTGTCGTTTCAAGCAAACACTACGCTCACCGTTGAAGGGATTGAGTTTATCAAGTGTGAGGTTGTGGGACAAAGTTTCATGCTTCACCAGATTCGGAAAATGATGGGGCTTGCAGTAGCGATAATGAGGAATTTCGCTCCTGAATCAATTTTTGAGAGAGCATTCAAACAGGATGTTCATATCAATGTGCCTACAGCCCCAGAGGTGGGCTTGTACTTGGACGAATGTCTCTTCACTTCGTATAACAATAAATGGAAAGCCTCGCATGAGGAACTATCCATGAAAGACTATGCTGAAGAGGCTGAAGAATTCAAATTGAAGCACATATACTCCCACATTGCTAAAACTGAGCACAAGGAAGGAGCTGTTGCAGTTTGGTTACACTCCTTAAACTACCGGAACTACCCTGATCTTCGGCCTCAACCTGTGGATTGTGATACAGGGGTCGCCATTGAGAGCAAGAGCACTGAAGCTGAGACGCTAGCTGAAGGAGATTCAACAACTGTGCCTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47624.p1 GENE.S_Transcript_47624~~S_Transcript_47624.p1 ORF type:complete len:354 (+),score=82.46,PseudoU_synth_1|PF01416.16|2.6e-11 S_Transcript_47624:806-1867(+)
MGNKRDWHEKGVFKGFVQSGISSNSESASLNIIEKERDQMHCDVSLDGNGNGVVNNVVVEDSEVLAQCGISSNSEAALLCTEDGEKQKEECDVNVGNNGAAANLDANAVNSESMVVDEVCEGDSNGCGNGEKEKGKESSDFKYGNEEKERFNRILKYYEGTHNFHNFTTRTKAEDPSAKRYIVSFQANTTLTVEGIEFIKCEVVGQSFMLHQIRKMMGLAVAIMRNFAPESIFERAFKQDVHINVPTAPEVGLYLDECLFTSYNNKWKASHEELSMKDYAEEAEEFKLKHIYSHIAKTEHKEGAVAVWLHSLNYRNYPDLRPQPVDCDTGVAIESKSTEAETLAEGDSTTVPA*

Click here to download the sequence:
Link to NCBI Protein BLAST