Transcript Information: S_Transcript_47626.p1


Annotated TAIR IDAT1G20370.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7051846-7053588 | Reverse length=549
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28311703441681
Replicate 21.760328954057
Replicate 31.7657938803447
Condition 2: 8 Hour
Replicate 12.6089573260322
Replicate 21.7849879233824
Replicate 31.133821681116
Condition 3: 24 Hour
Replicate 11.6267466429166
Replicate 21.6877306493025
Replicate 31.4757579173206


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47626.p1 GENE.S_Transcript_47626~~S_Transcript_47626.p1 ORF type:3prime_partial len:188 (+),score=49.65 S_Transcript_47626:806-1366(+)
ATGGTTAATAAGAGGGATTGGGATGAAAAAGGTGTTTTTCTTTTTCAGCCAGACATTTCTTCGAACAGTGAGAGTGCATCTTTCCATACTATTGAGAAAGGGAGGGATCAAATGCACTGTGATGTTTCTTTGGATGGTAATGATAATGGGGTGGGAAATAATGTGATTGTTGAAGGCTCTAAGGTTTTAGCTCAGTGTGGCATTTCGTCGAACAGTGAAGCTGCATTGTTAAGTACTGAAGATAGTGAGAAGCAGAAGGAAGAATGTGATGTTAATGTAGGGAATAATGGTGCTGCTGCTAATTTAGATGCTAATGCTGTTAATTCTGAATCGATGGTCGTGGACGAGGTATGTGAAGGAGATTCAAATGGGTGTGGCAATGGAGAGAAGGAGAAGGGGAAGGAAAGTAGTGATTTCAAGTATGGGAATGAAGAAAAAGAGAGGTTCAATAGAATACTAAAGTATTACGAGGGGACACATAACTTTCATAACTTTACCACTAGAACAAAGGCGGAAGATCCGTCTGCAAAACGATACATTGTGTCGTTTCAAGCAAACACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47626.p1 GENE.S_Transcript_47626~~S_Transcript_47626.p1 ORF type:3prime_partial len:188 (+),score=49.65 S_Transcript_47626:806-1366(+)
MVNKRDWDEKGVFLFQPDISSNSESASFHTIEKGRDQMHCDVSLDGNDNGVGNNVIVEGSKVLAQCGISSNSEAALLSTEDSEKQKEECDVNVGNNGAAANLDANAVNSESMVVDEVCEGDSNGCGNGEKEKGKESSDFKYGNEEKERFNRILKYYEGTHNFHNFTTRTKAEDPSAKRYIVSFQANT

Click here to download the sequence:
Link to NCBI Protein BLAST