Transcript Information: S_Transcript_476287.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value4E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.63364288655192
Replicate 21.0506090265483
Replicate 30.32933457292144
Condition 2: 8 Hour
Replicate 10.63468423562896
Replicate 20.53266306285063
Replicate 30.76128027160648
Condition 3: 24 Hour
Replicate 11.6903778891531
Replicate 20.94432548234781
Replicate 31.3511809502741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_476287.p1 GENE.S_Transcript_476287~~S_Transcript_476287.p1 ORF type:5prime_partial len:168 (-),score=23.72,RVT_1|PF00078.23|4.8e-37 S_Transcript_476287:270-773(-)
TTTGATGGACTTCAAAATTTGATGGTCCCCAAAGTGGATTGTCCTAGCTCAGTGACAGAGTTTAGGCCAATTGCCTGTTGTACCATCCTGTACAAATGCATTTCTAAAATGCTTTGTAGCAGATTGAAGGAGGTGCTGCCATCTATTATTTCTGACACCCAGGGAGCCTTTGTGGAAGGTAGACAGATTGTGCATAATGTAATAATCTTGCAGGACATTACCAAACATTATAAGAGGAAGAGTATTTCTCCAAGATGCATTATGAAGCTGGATTTAAAGAAAGCTTATGACTCGGTGAATTGGGAATTTCTGAAAGAAATGCTGGAAGCTTTACAATTCCCTGTGGAGTTTATTAATTGGCTGGTTGCTTGCACCTGCACTTCTATGTATACCATTTCCTTTAATGGTGGTAATCATGATTTTTTTGCGGGTGCAAAGGGCCTCAGACAAGGTGACCCCCTATCTCCTCTTCTCTTTGTTATCTGTATGGAGTACCTGTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_476287.p1 GENE.S_Transcript_476287~~S_Transcript_476287.p1 ORF type:5prime_partial len:168 (-),score=23.72,RVT_1|PF00078.23|4.8e-37 S_Transcript_476287:270-773(-)
FDGLQNLMVPKVDCPSSVTEFRPIACCTILYKCISKMLCSRLKEVLPSIISDTQGAFVEGRQIVHNVIILQDITKHYKRKSISPRCIMKLDLKKAYDSVNWEFLKEMLEALQFPVEFINWLVACTCTSMYTISFNGGNHDFFAGAKGLRQGDPLSPLLFVICMEYLS*

Click here to download the sequence:
Link to NCBI Protein BLAST