Transcript Information: S_Transcript_47630.p1


Annotated TAIR IDAT1G20370.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7051846-7053588 | Reverse length=549
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99090962045885
Replicate 20.82148684522661
Replicate 30.78479728015322
Condition 2: 8 Hour
Replicate 11.4746280538443
Replicate 20.11899919489216
Replicate 31.0204395130044
Condition 3: 24 Hour
Replicate 10.58098094389878
Replicate 20.48220875694356
Replicate 31.2074382959896


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47630.p1 GENE.S_Transcript_47630~~S_Transcript_47630.p1 ORF type:3prime_partial len:188 (+),score=54.09 S_Transcript_47630:803-1363(+)
ATGGTTAATAAGAGGGATTGGGATGAAAAAGGTGTTTTTCTTTTTCAGCCAGACATTTCTTCGAACAGTGAGAGTGCATCTTTGAATACTATTGAGAAAGAGGGGGATCAAATGCACTGTGATGTTTCTTTGGATGGTAATGGTAATGGGGTGGGAAATAATGTGGTTGTTGAAGGTTATGAGGTTTCAGCTCAGTGTGGCATTTCGTTGAAATGTGAGGCTGCATTGTTGAGTACTGAAGATGGTGAGAAGCAGAAGGAAGAGTGTGATGTTAATGTACGGAACAATGGTGCTGCTGCTAATTTAGATGCTAATGCTGTTAATTCTGAATCGATGGTCGTGGACGAGGTATGTGAAGGAGATTCAAATGGGTGTGGCAATGGAGAGAAGGAGAAGGGGAAGGAAAGTAGTGATTTCAAGTATGGGAATGAAGAAAAAGAGAGGTTCAATAGAATACTAAAGTATTACGAGGGGACACATAACTTTCATAACTTTACCACTAGAACAAAGGCGGAAGATCCGTCTGCAAAACGATACATTGTGTCGTTTCAAGCAAACACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47630.p1 GENE.S_Transcript_47630~~S_Transcript_47630.p1 ORF type:3prime_partial len:188 (+),score=54.09 S_Transcript_47630:803-1363(+)
MVNKRDWDEKGVFLFQPDISSNSESASLNTIEKEGDQMHCDVSLDGNGNGVGNNVVVEGYEVSAQCGISLKCEAALLSTEDGEKQKEECDVNVRNNGAAANLDANAVNSESMVVDEVCEGDSNGCGNGEKEKGKESSDFKYGNEEKERFNRILKYYEGTHNFHNFTTRTKAEDPSAKRYIVSFQANT

Click here to download the sequence:
Link to NCBI Protein BLAST