Transcript Information: S_Transcript_47631.p2


Annotated TAIR IDAT5G57550.1
Annotated Gene Namexyloglucan endotransglucosylase/hydrolase 25
Annotated Gene Symbol(s)XTR3, XTH25
Annotation TypeOrtholog
Chromosome Positionchr5:23305055-23306384 | Reverse length=284
E-Value1.1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.359026064383
Replicate 23.2333398489461
Replicate 34.1337167083932
Condition 2: 8 Hour
Replicate 15.1475080075838
Replicate 22.8929114620336
Replicate 36.7990203567613
Condition 3: 24 Hour
Replicate 13.2014053391388
Replicate 24.2983090920659
Replicate 31.3045885037129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47631.p2 GENE.S_Transcript_47631~~S_Transcript_47631.p2 ORF type:complete len:116 (+),score=12.05,XET_C|PF06955.8|5.1e+03,XET_C|PF06955.8|5.4e-20,Glyco_hydro_16|PF00722.17|1.8e-07 S_Transcript_47631:2811-3158(+)
ATGGGAATACCATTCCCAAAGATGCAGGCAATGAAGCTGTATTCAAGCATATGGAATGCAGATCAGTGGGCAACCCAAGGTGGTCGTATAAAGACGGACTGGAGTCAAGCCCCGTTCAGTTCGTCGTACCGTAATTTCAAGGCTGAAGCATGTGTTCAAGTTCGAGCAAAGAGAGCAGCTACAATGTCCTGCTCTCCAGCGGCTAGATATACCTGGATGACCCGCAAGTTGGACGGTACCAGCCAAGACAGGCTCAATTGGGTCCGTAAAAACTTCATGATCTACAACTACTGCACCGACACTAAGAGGTTTGCTCAAGGCCTCCCCAAGGAATGTCATCTCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47631.p2 GENE.S_Transcript_47631~~S_Transcript_47631.p2 ORF type:complete len:116 (+),score=12.05,XET_C|PF06955.8|5.1e+03,XET_C|PF06955.8|5.4e-20,Glyco_hydro_16|PF00722.17|1.8e-07 S_Transcript_47631:2811-3158(+)
MGIPFPKMQAMKLYSSIWNADQWATQGGRIKTDWSQAPFSSSYRNFKAEACVQVRAKRAATMSCSPAARYTWMTRKLDGTSQDRLNWVRKNFMIYNYCTDTKRFAQGLPKECHLM*

Click here to download the sequence:
Link to NCBI Protein BLAST