Transcript Information: S_Transcript_47649.p1


Annotated TAIR IDAT5G62550.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 14949 Blast hits to 9947 proteins in 971 species: Archae - 43; Bacteria - 3248; Metazoa - 4424; Fungi - 1542; Plants - 562; Viruses - 55; Other Eukaryotes - 5075 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:25105839-25107875 | Reverse length=487
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.1390623074831
Replicate 23.4996148953299
Replicate 32.5438256667035
Condition 2: 8 Hour
Replicate 13.0885048045503
Replicate 22.700050697898
Replicate 34.1161636754447
Condition 3: 24 Hour
Replicate 11.1299077667549
Replicate 22.9697408272455
Replicate 32.0003690390265


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47649.p1 GENE.S_Transcript_47649~~S_Transcript_47649.p1 ORF type:3prime_partial len:290 (+),score=65.99 S_Transcript_47649:72-869(+)
ATGGAAGAGATTGCTAAGGATCAACTATCATCCGTTGCTTCAGGAAACGGGCCAAGGAAATCAATTCTTAGGTACCCATTGCGATCTGCTACAAAATTGAAGGATCAGATCAGCAAGTCCCCTGATGCTGCAAACTCTGTTTCTGCAACTTATAAAAGGGGAAGGCCTCCTTCCAGTGTGAGTAAAAGTGTTAGTGTACTTGAAGTTTCTGGTAAGGACAAGTCTGGCAGCAAGGCACCAGCAAGAAGGCTCTCCATTCCTACCAAGTCGAGTGCGAGCCCTCGTCAAAAACCCACTACTGCTAGTAGTAACAACAACAGCATCACACCAATTTCAGAGGTCAGGGCAAAGAGGTCTGCCAATGGGCAGGACAAGTTTGACACACCGCGTTCTGATGCTTCCAAATCATCTACTCGTCGAAAGTTCAATGTCCTGTCATCATCATCCTATTGGCTACAACAAATTAAGCTTTCAGAGTCTGCTTCCAAACACTCTCTTTCACTTGCCTTCTTCAAACTTGCCCTGGAGGCTGGAAGTGAGCCTCTGCAGCTACTGCGTGAGGAGTTAAAATCCTATGTAAGGAGGCACAATCTTGCTGATTATGGAGACACTATCAGAGACTTAAATAACAGCTACGAAATATCAGATACCTTGGAACAGTTACAGGTATCTGAGACCTGCTCTCATGTGCCTGAAGGAGCAAGTAGTGTCTCTGATGAGAGCGCCACTTCTACAGCAGATACCAGGAAGCTCAGACCGAAATCATTGAGTACCGATGCTCAGGTGTCTTCAGCCAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47649.p1 GENE.S_Transcript_47649~~S_Transcript_47649.p1 ORF type:3prime_partial len:290 (+),score=65.99 S_Transcript_47649:72-869(+)
MEEIAKDQLSSVASGNGPRKSILRYPLRSATKLKDQISKSPDAANSVSATYKRGRPPSSVSKSVSVLEVSGKDKSGSKAPARRLSIPTKSSASPRQKPTTASSNNNSITPISEVRAKRSANGQDKFDTPRSDASKSSTRRKFNVLSSSSYWLQQIKLSESASKHSLSLAFFKLALEAGSEPLQLLREELKSYVRRHNLADYGDTIRDLNNSYEISDTLEQLQVSETCSHVPEGASSVSDESATSTADTRKLRPKSLSTDAQVSSAK

Click here to download the sequence:
Link to NCBI Protein BLAST