Transcript Information: S_Transcript_476984.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39426668496564
Replicate 20.32685614159281
Replicate 30
Condition 2: 8 Hour
Replicate 10.15796585420098
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_476984.p1 GENE.S_Transcript_476984~~S_Transcript_476984.p1 ORF type:internal len:135 (-),score=13.12,RVT_2|PF07727.10|7.1e-33 S_Transcript_476984:2-403(-)
CATCCCAAATATCAAGACCATAATACAACGATTACCAAATCTCCTATGTCCCGTAACCCTCTCACTGCTCTTCGTGACCCGAATTGGAAAATGGCCATGGATGAGGAATTTAATGCTCTTATTAAAAATAAGACGTGGGATTTAGTGCCCCGTCCATCTCATGCTAATATCATTCACTCTATGTGGATTTTTGTTCATAAAGAAAATTTTGATGGTTCTTTTGAGCGGCATAAAGCTCGTCTTGTAGGTGATGGCAAGACTCAACAGGTTGGTGTGGATTGTGGGGAGACTTTCAGTCCCGTGGTCAAACCCGCGACCATCCGGACAGTTCTTAGTCTCGCCTTGTCCAAGAATTGGCATATTCATCAGTTGGATGTTAAAAATGCATTTCTACATGGCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_476984.p1 GENE.S_Transcript_476984~~S_Transcript_476984.p1 ORF type:internal len:135 (-),score=13.12,RVT_2|PF07727.10|7.1e-33 S_Transcript_476984:2-403(-)
HPKYQDHNTTITKSPMSRNPLTALRDPNWKMAMDEEFNALIKNKTWDLVPRPSHANIIHSMWIFVHKENFDGSFERHKARLVGDGKTQQVGVDCGETFSPVVKPATIRTVLSLALSKNWHIHQLDVKNAFLHGE

Click here to download the sequence:
Link to NCBI Protein BLAST