Transcript Information: S_Transcript_477039.p1


Annotated TAIR IDAT1G27660.1
Annotated Gene Namebasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:9621701-9625666 | Forward length=453
E-Value7E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46689475851194
Replicate 20.22118084769438
Replicate 30.184889584798
Condition 2: 8 Hour
Replicate 10.1068941870533
Replicate 20.16820938826862
Replicate 30.053423176954841
Condition 3: 24 Hour
Replicate 10.054749081430061
Replicate 20.1704045983184
Replicate 30.12642628774494


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_477039.p1 GENE.S_Transcript_477039~~S_Transcript_477039.p1 ORF type:5prime_partial len:399 (+),score=67.38 S_Transcript_477039:3-1199(+)
ACCACCAATTTTCAGCAACACCGGCAACAGCAGCAACTCCAAGACTACTTTGTTGTTGGAAGCTCTCCTTTAAACAACCCTTCTGGATATGGAGTTTCTTCTTCTCTTGAATGGAACCCCAACTTCTTGTCAACGAGGCGAACACCAAGCAACAGCAGCACCTTGAACAACAAGCCATACGAGAGTAGCAACGAATTTCCGGAAGCGAGCGGAGAAACGACAGCTTCAAACTTGAGTTATCCAACAAGCTGCAACCAACAGCTACCCAAGATTGAAGAGGACATGCTAAGCTCATTCCCTAGTTTCAGTGCCCTAATGAATCAGACTACAATTCCTACAGCTAGTATGGAAAATACTGCTAGTATTAATCCAGCTTGTACTTGGTTCAATGGCTTCGCTTTAGGTGCTCATTATTCTCCTTTGGATCATAAAGAACATCATCAGTCAATATCATATAACAGCAATTATACTACTAACAATAATAATTACTGGAGTAGTAGTATGCATGGTTTTGGGAATGCAAGCCTGCTGATTAATCAGATGGGAGGATTAGTATCTTCGCCTCATTCTACAACCACGTCAGTCTCAAGTAGTCCTCGCTTGGGTCTCAATTTGCAAGCCTCTGATTTCTTGGCCCACAATCCAAGTCTTGCTGGTGTTGGGGAAGAAGTTATCAGCCCACCTGGGAAGATCCTTTCCAACGAGGTATCAGCCTTGATGAATGGAGTAACAGGAACAAAAAGAGCGGCTGGGAGTTGTAATAGGAGTAGTGATCATCAGCCTAAGTCATCAACATCCAACAATACAGCAGCTGCCAATAAGAAGTCTCAGTTGAAGGTCTCTTGCCCTCCATTTAAGGTTAGAAAGGAGAAATTGGGAGATAGAATAGCAGCTCTACATCAATTGGTGTCTCCTTTTGGCAAGACGGATACTGCTTCTGTTTTAACAGAGGCAATCGGATACATCCAATTTCTTCAAGATCAAATCCATACCCTTTGCATGCCTCAAGCCAAGCCATCCCGCAACAAGCCTTGCAGACCTTTCCACATGGGAGCAAACATTAGCACTGAGGACGAGGGAAAGGAATTAGAAGAAAGAATCGATCTTCGAAGAAGAGGATTGTGCCTTGTGCCATCGTCTTGGACATCATATATTACGCCAGACCATTTGGATGGATCTAATCTTACCTATTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_477039.p1 GENE.S_Transcript_477039~~S_Transcript_477039.p1 ORF type:5prime_partial len:399 (+),score=67.38 S_Transcript_477039:3-1199(+)
TTNFQQHRQQQQLQDYFVVGSSPLNNPSGYGVSSSLEWNPNFLSTRRTPSNSSTLNNKPYESSNEFPEASGETTASNLSYPTSCNQQLPKIEEDMLSSFPSFSALMNQTTIPTASMENTASINPACTWFNGFALGAHYSPLDHKEHHQSISYNSNYTTNNNNYWSSSMHGFGNASLLINQMGGLVSSPHSTTTSVSSSPRLGLNLQASDFLAHNPSLAGVGEEVISPPGKILSNEVSALMNGVTGTKRAAGSCNRSSDHQPKSSTSNNTAAANKKSQLKVSCPPFKVRKEKLGDRIAALHQLVSPFGKTDTASVLTEAIGYIQFLQDQIHTLCMPQAKPSRNKPCRPFHMGANISTEDEGKELEERIDLRRRGLCLVPSSWTSYITPDHLDGSNLTYF*

Click here to download the sequence:
Link to NCBI Protein BLAST