Transcript Information: S_Transcript_477071.p1


Annotated TAIR IDAT3G01680.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:252033-255246 | Forward length=740
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.15232421655095
Replicate 20.15979891885519
Replicate 30.45676816296389
Condition 3: 24 Hour
Replicate 10
Replicate 20.16188436840248
Replicate 31.0809447602193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_477071.p1 GENE.S_Transcript_477071~~S_Transcript_477071.p1 ORF type:complete len:140 (-),score=8.41,SEO_N|PF14576.2|2.8e-64 S_Transcript_477071:295-714(-)
ATGGCAATATTTAACATAGTCACAAACTATGCATGGGACGCGAAAGTAGTTCTCGCTCTTGCAGCATTTGCGGTGTATTATGGTGAATTTTGGTTGGTTGCACAACTTTACACAACAAACTCACTGGCCAAATCAGTTGCAATTCTCAAGCAAGTACCTGACATAATGGAGCGGTCCGATGCCCTAAAACCCAAGTATGAAGCCATTGCCAATCTGATCAGAGCAATGATCAACGTTACCAAGTGTATTGTGGAATTCAACGAACTCCCACCTCAGTACATAACCCCAGATACGCCAGCATATGAAAGTGCCAATGCTCTGATCCCCACAGCTGCTTACTGGATCATCCGGAGTATAGTAGCCTGTGCATCACAAATTGTGGGCCTCGTAAGCATGAGCTATGAGTATGTCATTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_477071.p1 GENE.S_Transcript_477071~~S_Transcript_477071.p1 ORF type:complete len:140 (-),score=8.41,SEO_N|PF14576.2|2.8e-64 S_Transcript_477071:295-714(-)
MAIFNIVTNYAWDAKVVLALAAFAVYYGEFWLVAQLYTTNSLAKSVAILKQVPDIMERSDALKPKYEAIANLIRAMINVTKCIVEFNELPPQYITPDTPAYESANALIPTAAYWIIRSIVACASQIVGLVSMSYEYVIL*

Click here to download the sequence:
Link to NCBI Protein BLAST