Transcript Information: S_Transcript_47760.p1


Annotated TAIR IDAT5G25520.2
Annotated Gene NameSPOC domain / Transcription elongation factor S-II protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:8885550-8889484 | Forward length=997
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6112037074286
Replicate 24.8811481321935
Replicate 34.4610748048827
Condition 2: 8 Hour
Replicate 14.9696337317213
Replicate 25.4114796119693
Replicate 35.2189243398627
Condition 3: 24 Hour
Replicate 15.477330668733
Replicate 24.345568591335
Replicate 35.5056970087864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_47760.p1 GENE.S_Transcript_47760~~S_Transcript_47760.p1 ORF type:3prime_partial len:339 (+),score=66.01 S_Transcript_47760:283-1296(+)
ATGTCAAACACTCTTGTCTCACAGCAGCTTGCATTGCCGACATTGCAAGAAAGTCAATCGGGACTGAGTGATTCAGTTATCAGTGGATTAGATTCGCCCATGCAAAATTTTTCTGAAGGATCGACGGAACCCTTTAGCAGCATCCCTTTAACATTACCTTTATCAAACATGCAAGGGGACTATTGTATGTTTGGTACACCTGAAGCACAGGACACATTGATATCATGTAATGTGAATGGGCATTCTGACTCCCGTTCAAATTATGTGGAGATGCAGCAGTTTGCTTTACCTAGCCGGGAAACAGGTGAAGCACAAATTGTGCAGCCTGGATTGGCACAGTTGAAAGTGTCATTGCCAACCAAACGAAAGGCAGCTAGTGAGCGTAGTCCTGATAACCAAGGTCCACGAAATATGCTTGTGCCTAACCGGAAAGTGGCACAGGTGGGTTCCTTCCCAAAGGCACCTAGTACTACAAGTGCATGTATTCCAAACTCACCTAGGCTAACTGCCTCCGGCAGGAAGGTGGTGCAAGTTGAATCAGTCATGATTAAATCTCACTCTACTACTTCAAAGAAAAATGCACATCCACAAGTGTCTCCAAAAGCCCAGATAGGGGCTGATGAATCTGTGAGGGCCAAGCTGAGGGAATCATTAGCTTCTGCACTGGCCCTGGTTTCAAGACGGGAAAAATGTTCCCCAGATCAGAAGGTCATGATGGAAACTGAGTCCACAGCAGTTTCTCAGAAGGGTGTTGGGGAGCATAAACGTTTGGTTTTGGGGTCGAGCAATGAAGCTTCTAACCAGGAATCTCAAAAGGATGGAGAAACCTGTACTTCCAGCATTCCACATCAAGCAGACGGGAGTAATAATGTTGGAGACAGACACCAAACGAATAAAGTTTGCGAAAAGGCCACCGAGACATGGAACTATATGGAGCCAGACTTCCAGTATAATCATGTTTTGCCTGGGGAAGATGATTCCTTTAAGGACGGATTTACTTTTAAAGATGACCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_47760.p1 GENE.S_Transcript_47760~~S_Transcript_47760.p1 ORF type:3prime_partial len:339 (+),score=66.01 S_Transcript_47760:283-1296(+)
MSNTLVSQQLALPTLQESQSGLSDSVISGLDSPMQNFSEGSTEPFSSIPLTLPLSNMQGDYCMFGTPEAQDTLISCNVNGHSDSRSNYVEMQQFALPSRETGEAQIVQPGLAQLKVSLPTKRKAASERSPDNQGPRNMLVPNRKVAQVGSFPKAPSTTSACIPNSPRLTASGRKVVQVESVMIKSHSTTSKKNAHPQVSPKAQIGADESVRAKLRESLASALALVSRREKCSPDQKVMMETESTAVSQKGVGEHKRLVLGSSNEASNQESQKDGETCTSSIPHQADGSNNVGDRHQTNKVCEKATETWNYMEPDFQYNHVLPGEDDSFKDGFTFKDDL

Click here to download the sequence:
Link to NCBI Protein BLAST