Transcript Information: S_Transcript_477964.p1


Annotated TAIR IDAT3G42960.1
Annotated Gene NameTAPETUM 1
Annotated Gene Symbol(s)ATA1, ASD, TA1
Annotation TypeOrtholog
Chromosome Positionchr3:15018735-15019656 | Reverse length=272
E-Value1.5E-114
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.099302243414853
Replicate 20.24697152489755
Replicate 30.27526471766568
Condition 2: 8 Hour
Replicate 10.2387170557888
Replicate 20
Replicate 30.15907348958941
Condition 3: 24 Hour
Replicate 10.40755379646631
Replicate 20.16913292221155
Replicate 30.094112105989239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_477964.p1 GENE.S_Transcript_477964~~S_Transcript_477964.p1 ORF type:5prime_partial len:268 (+),score=39.83,adh_short|PF00106.21|2.3e-44,adh_short_C2|PF13561.2|2.8e-28,KR|PF08659.6|6.7e-06 S_Transcript_477964:1-804(+)
CAAAGGTTGAAGGGCAAGGTTGCTATCATAACTGGTGCTGCAAGAGGGATTGGAGCAGCTACGGCGAAACTATTTGCTTCGAATGGGGCTTTTGTAGTTCTAGCTGATATACTCGACGAGCTGGGGATAAGCCTTGCTGACTCCATCGGAGGCCGATACATACATTGTGATGTCTCCAAGGAAGCTGATGTAGAATCTGCTGTAAACCTAGCCTTAGCATGGAAGGGCCAGCTTGATATCATAGTTAATAATGCAGGCATATCCGGTTCCACTGCCAACGGGAGCATAAGCAACCTTAGAATGGATCAAGTGGGAAACGTCATTGCGGTTAACTTGTATGGTGTGGTGCATGGAATCAAGCATGCCGCCCGTGCTATGATCAAGAGCCAAAGAGGTGGCTCCATCATCTGTACCACGAGCACGGCTGCCCTCATGGGCGGGCTAGCATCGCACGCATACACAATGGCAAAGGCAGCAATCCTCGGCATGATGAGGAGCACAGCCTGTGAATTAGGGGTGCATGGAATTCGAGTTAACTGTGTTTCCCCTCATGGTGTCCCTTCCGAGATGCTCATTAGTGGCTACCGTTCATTTCTGGGAGATGTCGGAGAAGAAGAGGTCACCAAGATAGTCGCAGAGAAAGCTAGTCTATTACAGGGGCGAGGTGGAAGGCTCGAAGATGTTGCTGCCGGTGCCCTCTTTCTGGCAAGCGATGAAACAGGTTTCATAACCGGACATAATCTGGTCATTGATGGGGGTTACACTGCTGCCAGCAGCAACCTGAAGGATATGTACCAAGGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_477964.p1 GENE.S_Transcript_477964~~S_Transcript_477964.p1 ORF type:5prime_partial len:268 (+),score=39.83,adh_short|PF00106.21|2.3e-44,adh_short_C2|PF13561.2|2.8e-28,KR|PF08659.6|6.7e-06 S_Transcript_477964:1-804(+)
QRLKGKVAIITGAARGIGAATAKLFASNGAFVVLADILDELGISLADSIGGRYIHCDVSKEADVESAVNLALAWKGQLDIIVNNAGISGSTANGSISNLRMDQVGNVIAVNLYGVVHGIKHAARAMIKSQRGGSIICTTSTAALMGGLASHAYTMAKAAILGMMRSTACELGVHGIRVNCVSPHGVPSEMLISGYRSFLGDVGEEEVTKIVAEKASLLQGRGGRLEDVAAGALFLASDETGFITGHNLVIDGGYTAASSNLKDMYQG*

Click here to download the sequence:
Link to NCBI Protein BLAST