Transcript Information: S_Transcript_477986.p1


Annotated TAIR IDAT3G24060.1
Annotated Gene NamePlant self-incompatibility protein S1 family
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8689589-8690032 | Reverse length=147
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.4191530928091
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.16148369397713
Condition 3: 24 Hour
Replicate 10.16549154159541
Replicate 20
Replicate 30.19107609397815


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_477986.p1 GENE.S_Transcript_477986~~S_Transcript_477986.p1 ORF type:complete len:132 (-),score=14.84,Self-incomp_S1|PF05938.7|5.6e-09 S_Transcript_477986:67-462(-)
ATGGTGAAAAATATAGGCTTTAGCTTGCCTCAAATTTCAATTGGTCTAGTAACAGTACTCTTTTTCCTCATTACCATCTCCAATCAATTCCAACCTACAATTTCCAAAAACCAGCATGACAAAAGTATCTTATTTGTTACATACCATGCCCACATAACAAATGACTTTTCCAATGGTTCAATATTGTTGGCAGAAGAATGCACATCGAGAGGAGGCAAAGATCTTGGGCTACATTATCTGAAGCAACATGAGCAATTTCAATGGAAGTTTAAGATGGATGTTTGGAGGAGAGCTCGATATATTTGCTGGGTTGCACAAATAACTCCTGACGTGGTGAAGATTAAGGGACAACCTTCTGTGCATTTAAAGCAAGTAGAGATGAGTGGAATTGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_477986.p1 GENE.S_Transcript_477986~~S_Transcript_477986.p1 ORF type:complete len:132 (-),score=14.84,Self-incomp_S1|PF05938.7|5.6e-09 S_Transcript_477986:67-462(-)
MVKNIGFSLPQISIGLVTVLFFLITISNQFQPTISKNQHDKSILFVTYHAHITNDFSNGSILLAEECTSRGGKDLGLHYLKQHEQFQWKFKMDVWRRARYICWVAQITPDVVKIKGQPSVHLKQVEMSGIV*

Click here to download the sequence:
Link to NCBI Protein BLAST