Transcript Information: S_Transcript_478401.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.13847656050086
Replicate 20
Replicate 30.27682918967508
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.16377950912413


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_478401.p1 GENE.S_Transcript_478401~~S_Transcript_478401.p1 ORF type:internal len:154 (+),score=17.27,RVT_1|PF00078.23|1.6e-14 S_Transcript_478401:3-461(+)
AGGGGTTATTTTGAAGGTAAGTGTGGATTAAGACAAGGGGATCCAATCTCACCCTATATGTTTGTCCTCTGTATGGAGGGTTTTTGTAGAATGATGAGAAAGATGGGCAGTTTGAAGGAGTTTTCTTATCATCCCAAAACTGTTAGAGTGAAACTGAACCATATAATCGTTGCTGATGATCTGTTGGTTTTCACCAGAGGTGATATCCCTGTTGTACAGTTAGCTTTAAAGTGTTTAAACTCTTTCTCAGACATAACAGGATTGCATATCAACCCAGCAAAATTTGAGATCTATAGGGGAAGGGTGAAACAAGACATTCAGAAACAGATTCTGGACTATTCAAGCTTTGTGAAGGGCTCATTGCCGGTCAGGTATCTGGGGCTACCATTAAGTTCAACAGGCATAACTGGTGATATGTGTAGAAATTTGGTTGATAAGATCATAAAGAATTTGAATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_478401.p1 GENE.S_Transcript_478401~~S_Transcript_478401.p1 ORF type:internal len:154 (+),score=17.27,RVT_1|PF00078.23|1.6e-14 S_Transcript_478401:3-461(+)
RGYFEGKCGLRQGDPISPYMFVLCMEGFCRMMRKMGSLKEFSYHPKTVRVKLNHIIVADDLLVFTRGDIPVVQLALKCLNSFSDITGLHINPAKFEIYRGRVKQDIQKQILDYSSFVKGSLPVRYLGLPLSSTGITGDMCRNLVDKIIKNLNN

Click here to download the sequence:
Link to NCBI Protein BLAST