Transcript Information: S_Transcript_478402.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.89706745736563
Replicate 20.24789651188219
Replicate 30.82888701499328
Condition 2: 8 Hour
Replicate 10
Replicate 20.25136908583962
Replicate 30
Condition 3: 24 Hour
Replicate 10.4908962582156
Replicate 20.50929913654713
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_478402.p1 GENE.S_Transcript_478402~~S_Transcript_478402.p1 ORF type:complete len:89 (+),score=4.66,zf-RVT|PF13966.2|1e-10 S_Transcript_478402:1256-1522(+)
ATGCCTAAACACTCCATTATTTCTATGATGGATATTTCTAAGGCTTTACCTACCCATGACAACCTAACTAGGAGAGGTATCTGTATAGTTAGTAGATGTGTGCTCTGCTGTAATCAGAAAGAAGATGTATCCCACATCTTCTTTAAGCGTGCATATGCTGAGGCAGTATGGAGGGCGATCCTGGCGTGGATGAAAATATATAGAAGAGGTCTAAGCTTGGGAAGGAAGCTTAAATGGTACGCGAATCATGTAAAAGGGAAGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_478402.p1 GENE.S_Transcript_478402~~S_Transcript_478402.p1 ORF type:complete len:89 (+),score=4.66,zf-RVT|PF13966.2|1e-10 S_Transcript_478402:1256-1522(+)
MPKHSIISMMDISKALPTHDNLTRRGICIVSRCVLCCNQKEDVSHIFFKRAYAEAVWRAILAWMKIYRRGLSLGRKLKWYANHVKGKS*

Click here to download the sequence:
Link to NCBI Protein BLAST